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NECEvent2014_3_3_scaffold_325

Alias: 173_001_scaffold_325

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_3_scaffold_325_1
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..108
DNA (108bp) protein (36aa)
glnA1; glutamine synthetase (EC:6.3.1.2)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacteriu
Glutamine synthetase n=4 Tax=Bifidobacterium dentium RepID=D2QAT9_BIFDB
NECEvent2014_3_3_scaffold_325_2
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(275..511)
DNA (237bp) protein (79aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q602_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:ETO96333.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
NECEvent2014_3_3_scaffold_325_3
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(639..1766)
DNA (1128bp) protein (376aa)
ATP-dependent carboxylate-amine ligase n=2 Tax=Bifidobacterium dentium RepID=D2QAU0_BIFDB rbh
ATP-grasp domain protein {ECO:0000313|EMBL:ETO96344.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
ATP-dependent carboxylate-amine ligase
NECEvent2014_3_3_scaffold_325_4
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2194..3723)
DNA (1530bp) protein (510aa)
Sugar transporter superfamily protein n=2 Tax=Bifidobacterium dentium RepID=D2QAU1_BIFDB rbh
Transporter, major facilitator family protein {ECO:0000313|EMBL:ETO96272.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidoba
sugar ABC transporter
NECEvent2014_3_3_scaffold_325_5
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3747..4265)
DNA (519bp) protein (173aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5Z7_9BIFI rbh
Uncharacterized protein {ECO:0000313|EMBL:EFM42071.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27
phage integrase
NECEvent2014_3_3_scaffold_325_6
unknown

Not on your lists

comp(4479..4961)
DNA (483bp) protein (161aa)

This feature has no annotations

NECEvent2014_3_3_scaffold_325_7
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5337..5627
DNA (291bp) protein (97aa)
Toxin-antitoxin system, antitoxin component, HicB family n=2 Tax=Bifidobacterium dentium RepID=B1S9B5_9BIFI
PF03681 family protein {ECO:0000313|EMBL:ETO96215.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
NECEvent2014_3_3_scaffold_325_8
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5752..6156)
DNA (405bp) protein (135aa)
Uncharacterized protein {ECO:0000313|EMBL:ETO97288.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
NECEvent2014_3_3_scaffold_325_9
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6651..7685)
DNA (1035bp) protein (345aa)
lipase (EC:3.1.1.79)
Lipase {ECO:0000313|EMBL:ADB09931.1}; EC=3.1.1.79 {ECO:0000313|EMBL:ADB09931.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifi
Lipase n=4 Tax=Bifidobacterium dentium RepID=D2QAU5_BIFDB rbh
NECEvent2014_3_3_scaffold_325_10
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7687..9135)
DNA (1449bp) protein (483aa)
MFS transporter, SP family n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S9B0_9BIFI rbh
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27251.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium
glucose/fructose transport protein rbh
NECEvent2014_3_3_scaffold_325_11
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9336..9953
DNA (618bp) protein (206aa)
Transcriptional regulator, AraC family n=2 Tax=Bifidobacterium dentium RepID=D2QAU7_BIFDB rbh
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ADB09933.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium
NECEvent2014_3_3_scaffold_325_12
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10006..10221
DNA (216bp) protein (72aa)
Transcriptional regulator, AraC family n=2 Tax=Bifidobacterium dentium RepID=D2QAU7_BIFDB
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EFM42066.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium
NECEvent2014_3_3_scaffold_325_13
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10298..11068)
DNA (771bp) protein (257aa)
Uncharacterized protein n=3 Tax=Bifidobacterium dentium RepID=B1S9A8_9BIFI rbh
Type I site-specific deoxyribonuclease {ECO:0000313|EMBL:ETO96256.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium
res; type III restriction protein res subunit
NECEvent2014_3_3_scaffold_325_14
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11342..11827)
DNA (486bp) protein (162aa)
Sortase n=4 Tax=Bifidobacterium dentium RepID=D2QAU9_BIFDB rbh
sortase
Sortase {ECO:0000313|EMBL:ADB09935.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DS
NECEvent2014_3_3_scaffold_325_15
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12492..12653)
DNA (162bp) protein (54aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5Y7_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM42061.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27
NECEvent2014_3_3_scaffold_325_16
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12841..13446)
DNA (606bp) protein (202aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S9A0_9BIFI rbh
Uncharacterized protein {ECO:0000313|EMBL:ETO96265.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
NECEvent2014_3_3_scaffold_325_17
unknown

Not on your lists

comp(13412..13564)
DNA (153bp) protein (51aa)

This feature has no annotations

NECEvent2014_3_3_scaffold_325_18
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13807..14346)
DNA (540bp) protein (180aa)
Lysine decarboxylase n=2 Tax=Bifidobacterium dentium RepID=D2QAV2_BIFDB rbh
TIGR00730 family protein {ECO:0000313|EMBL:ETO96329.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
lysine decarboxylase rbh
NECEvent2014_3_3_scaffold_325_19
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14425..15249)
DNA (825bp) protein (275aa)
Cobalt transport protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5Y3_9BIFI rbh
Cobalt transport protein {ECO:0000313|EMBL:ETO96168.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
ABC transporter permease
NECEvent2014_3_3_scaffold_325_20
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15246..15989)
DNA (744bp) protein (248aa)
ABC transporter ATP-binding protein (EC:3.6.3.17)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium dentium JCVIHMP022 RepID=E1N8B6_9BIFI rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ETO96317.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium s
Displaying 20 items

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