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NECEvent2014_3_3_scaffold_329

Alias: 173_001_scaffold_329

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_3_scaffold_329_1
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(145..906)
DNA (762bp) protein (254aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1SAC4_9BIFI rbh
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:ETO96515.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;
NECEvent2014_3_3_scaffold_329_2
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1075..1818
DNA (744bp) protein (248aa)
Transcriptional regulatory protein, C-terminal domain protein n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0QAL7_9BIFI rbh
response regulator-like transcriptional regulatory protein
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27853.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium
NECEvent2014_3_3_scaffold_329_3
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1903..2532
DNA (630bp) protein (210aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) l
nth; endonuclease III (EC:4.2.99.18)
Endonuclease III n=2 Tax=Bifidobacterium dentium RepID=D2Q6K8_BIFDB rbh
NECEvent2014_3_3_scaffold_329_4
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2585..4129
DNA (1545bp) protein (515aa)
ABC transporter, substrate-binding protein, family 5 n=2 Tax=Bifidobacterium dentium RepID=E0QAL5_9BIFI rbh
ABC transporter, substrate-binding protein, family 5 {ECO:0000313|EMBL:ETO96514.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="B
peptides ABC transporter substrate-binding protein
NECEvent2014_3_3_scaffold_329_5
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


4211..7000
DNA (2790bp) protein (930aa)
Valine--tRNA ligase {ECO:0000256|SAAS:SAAS00105779}; EC=6.1.1.9 {ECO:0000256|SAAS:SAAS00105779};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacteriu
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0QAL4_9BIFI rbh
NECEvent2014_3_3_scaffold_329_6
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7058..9121)
DNA (2064bp) protein (688aa)
Uncharacterized protein n=3 Tax=Bifidobacterium dentium RepID=E0QAL3_9BIFI rbh
Uncharacterized protein {ECO:0000313|EMBL:ETO96519.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
NECEvent2014_3_3_scaffold_329_7
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9223..9636)
DNA (414bp) protein (138aa)
tyrA; chorismate mutase TyrA (EC:5.4.99.5)
Chorismate mutase {ECO:0000313|EMBL:EFM40360.1}; EC=5.4.99.5 {ECO:0000313|EMBL:EFM40360.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" s
Chorismate mutase TyrA n=4 Tax=Bifidobacterium dentium RepID=D2Q6L3_BIFDB
NECEvent2014_3_3_scaffold_329_8
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9653..10129)
DNA (477bp) protein (159aa)
Transcriptional regulator, AsnC family n=2 Tax=Bifidobacterium dentium RepID=D2Q6L4_BIFDB rbh
AsnC family transcriptional regulator
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ADB10555.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium
NECEvent2014_3_3_scaffold_329_9
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10562..12583)
DNA (2022bp) protein (674aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=871562 specie
Transcription termination factor Rho n=3 Tax=Bifidobacterium dentium RepID=E0QAL0_9BIFI rbh
rho; transcription termination factor Rho
NECEvent2014_3_3_scaffold_329_10
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12844..14433)
DNA (1590bp) protein (530aa)
Flavin containing amine oxidoreductase n=4 Tax=Bifidobacterium dentium RepID=D2Q6L6_BIFDB rbh
flavin containing amine oxidoreductase
Flavin containing amine oxidoreductase {ECO:0000313|EMBL:ADB10557.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium
NECEvent2014_3_3_scaffold_329_11
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14637..15683)
DNA (1047bp) protein (349aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1) RepID=D2Q6L7_BIFDB rbh
hypothetical protein
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27863.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium
Displaying 11 items

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