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NECEvent2014_3_3_scaffold_357

Alias: 173_001_scaffold_357

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_3_scaffold_357_1
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..577
DNA (576bp) protein (192aa)
glycosyltransferase (EC:2.4.1.212)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:ETO98053.1}; EC=2.4.-.- {ECO:0000313|EMBL:ETO98053.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteria
Glycosyltransferase, group 2 family protein n=4 Tax=Bifidobacterium dentium RepID=E1ND58_9BIFI rbh
NECEvent2014_3_3_scaffold_357_2
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(776..1927)
DNA (1152bp) protein (384aa)
fucO; Lactaldehyde reductase (EC:1.2.1.10)
FucO Lactaldehyde reductase n=2 Tax=Bifidobacterium dentium RepID=D2Q8S3_BIFDB rbh
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ26508.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium
NECEvent2014_3_3_scaffold_357_3
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2124..2555)
DNA (432bp) protein (144aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S5Q0_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB09208.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain
NECEvent2014_3_3_scaffold_357_4
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2565..3608)
DNA (1044bp) protein (348aa)
Sortase {ECO:0000313|EMBL:ETO98089.1}; EC=3.4.22.- {ECO:0000313|EMBL:ETO98089.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bi
Sortase family protein n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q8D9_9BIFI rbh
sortase
NECEvent2014_3_3_scaffold_357_5
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3736..5529)
DNA (1794bp) protein (598aa)
LPXTG-motif cell wall anchor domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q8E0_9BIFI rbh
Fimbrial isopeptide formation D2 domain protein {ECO:0000313|EMBL:ETO98128.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifido
hypothetical protein rbh
NECEvent2014_3_3_scaffold_357_6
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5638..8928)
DNA (3291bp) protein (1097aa)
Polymorphic outer membrane protein repeat (3 repeats) n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q8E1_9BIFI rbh
Cna protein B-type domain protein {ECO:0000313|EMBL:ETO98316.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp.
hypothetical protein
NECEvent2014_3_3_scaffold_357_trna_5
unknown

Not on your lists

comp(9142..9214)
DNA (73bp)
transferRNA
NECEvent2014_3_3_scaffold_357_trna_4
unknown

Not on your lists

comp(9246..9319)
DNA (74bp)
transferRNA
NECEvent2014_3_3_scaffold_357_trna_3
unknown

Not on your lists

comp(9345..9416)
DNA (72bp)
transferRNA
NECEvent2014_3_3_scaffold_357_7
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9550..10395)
DNA (846bp) protein (282aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; t
tRNA (m(7)G46) methyltransferase (EC:2.1.1.33) rbh
tRNA (guanine-N(7)-)-methyltransferase n=2 Tax=Bifidobacterium dentium RepID=D2Q8R8_BIFDB rbh
NECEvent2014_3_3_scaffold_357_8
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10521..11600
DNA (1080bp) protein (360aa)
UDP-glucose 4-epimerase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0D9_BIFAA rbh
UDP-glucose 4-epimerase rbh
UDP-glucose 4-epimerase {ECO:0000313|EMBL:AII75823.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
NECEvent2014_3_3_scaffold_357_9
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11766..12359
DNA (594bp) protein (198aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1S5Q8_9BIFI rbh
PF13828 domain protein {ECO:0000313|EMBL:ETO98279.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
NECEvent2014_3_3_scaffold_357_trna_1
unknown

Not on your lists

12454..12527
DNA (74bp)
transferRNA
NECEvent2014_3_3_scaffold_357_trna_2
unknown

Not on your lists

12567..12639
DNA (73bp)
transferRNA
NECEvent2014_3_3_scaffold_357_10
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12686..13183)
DNA (498bp) protein (166aa)
ptpA; protein tyrosine phosphatase (EC:3.1.3.2) rbh
Low molecular weight phosphotyrosine protein phosphatase n=3 Tax=Bifidobacterium dentium RepID=B1S5Q9_9BIFI rbh
Putative low molecular weight protein-tyrosine-phosphatase {ECO:0000313|EMBL:ETO98179.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" sou
NECEvent2014_3_3_scaffold_357_11
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13192..13857)
DNA (666bp) protein (222aa)
dfrA; dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase {ECO:0000313|EMBL:ETO98088.1}; EC=1.5.1.3 {ECO:0000313|EMBL:ETO98088.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacteriu
DfrA Dihydrofolate reductase n=2 Tax=Bifidobacterium dentium RepID=D2Q8R3_BIFDB rbh
NECEvent2014_3_3_scaffold_357_12
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13915..14571)
DNA (657bp) protein (219aa)
thyA; thyA Thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:000
Thymidylate synthase n=2 Tax=Bifidobacterium dentium RepID=D2Q8R2_BIFDB
NECEvent2014_3_3_scaffold_357_13
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14816..15229
DNA (414bp) protein (138aa)
OsmC-like protein n=4 Tax=Bifidobacterium dentium RepID=B1S5R2_9BIFI
hypothetical protein
OsmC-like protein {ECO:0000313|EMBL:ETO98324.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
NECEvent2014_3_3_scaffold_357_14
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15354..16388)
DNA (1035bp) protein (345aa)
Universal stress protein family member n=4 Tax=Bifidobacterium dentium RepID=D2Q8R0_BIFDB rbh
Universal stress protein family member
Universal stress protein family member {ECO:0000313|EMBL:ADB09196.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium
NECEvent2014_3_3_scaffold_357_15
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16560..17297)
DNA (738bp) protein (246aa)
Hypothetical NLP/P60 protein {ECO:0000313|EMBL:ADB09195.1}; EC=3.4.19.11 {ECO:0000313|EMBL:ADB09195.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidoba
NlpC/P60 family protein n=2 Tax=Bifidobacterium dentium RepID=B1S5R4_9BIFI rbh
hypothetical protein
NECEvent2014_3_3_scaffold_357_16
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17365..18321)
DNA (957bp) protein (319aa)
surface antigen (EC:3.5.1.28)
Surface antigen n=2 Tax=Bifidobacterium dentium RepID=D2Q8Q8_BIFDB rbh
CHAP domain protein {ECO:0000313|EMBL:ETO98099.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
NECEvent2014_3_3_scaffold_357_17
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18353..19672
DNA (1320bp) protein (440aa)
Putative phosphoserine transaminase {ECO:0000313|EMBL:EFM41095.1}; EC=2.6.1.52 {ECO:0000313|EMBL:EFM41095.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bi
phosphoserine aminotransferase (EC:2.6.1.52)
SerC Phosphoserine aminotransferase n=4 Tax=Bifidobacterium dentium RepID=D2Q8Q7_BIFDB rbh
NECEvent2014_3_3_scaffold_357_18
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19669..21054)
DNA (1386bp) protein (462aa)
Phosphomannose isomerase type I {ECO:0000313|EMBL:EFM41096.1}; EC=5.3.1.8 {ECO:0000313|EMBL:EFM41096.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidob
mannose-6-phosphate isomerase (EC:5.3.1.8) rbh
Phosphomannose isomerase type I n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q8F4_9BIFI rbh
NECEvent2014_3_3_scaffold_357_19
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21120..21374
DNA (255bp) protein (85aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S5R8_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFM41097.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27
NECEvent2014_3_3_scaffold_357_20
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21381..22403)
DNA (1023bp) protein (341aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
Pho-related sensory transduction protein kinase (EC:2.7.13.3)
Pho-related sensory transduction protein kinase n=2 Tax=Bifidobacterium dentium RepID=D2Q8Q4_BIFDB rbh
Displaying 25 items

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