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NECEvent2014_3_3_scaffold_414

Alias: 173_001_scaffold_414

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_3_scaffold_414_1
unknown

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comp(3..62)
DNA (60bp) protein (20aa)

This feature has no annotations

NECEvent2014_3_3_scaffold_414_2
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(167..454)
DNA (288bp) protein (96aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1S756_9BIFI
ESAT-6-like protein {ECO:0000256|RuleBase:RU362001}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 2767
glnD; [protein-PII] uridylyltransferase
NECEvent2014_3_3_scaffold_414_3
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(494..805)
DNA (312bp) protein (104aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S755_9BIFI
hypothetical protein
ESAT-6-like protein {ECO:0000256|RuleBase:RU362001}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain A
NECEvent2014_3_3_scaffold_414_4
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1237..2646
DNA (1410bp) protein (470aa)
CD9/CD37/CD63 antigen n=2 Tax=Bifidobacterium dentium RepID=D2Q5F5_BIFDB rbh
Putative membrane protein {ECO:0000313|EMBL:ETO95761.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;
CD9/CD37/CD63 antigen
NECEvent2014_3_3_scaffold_414_5
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2681..5218
DNA (2538bp) protein (846aa)
serine protease (EC:3.4.21.48) rbh
Serine protease n=2 Tax=Bifidobacterium dentium RepID=D2Q5F6_BIFDB rbh
Type VII secretion protein EccB {ECO:0000313|EMBL:ETO95808.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MS
NECEvent2014_3_3_scaffold_414_6
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5236..5961)
DNA (726bp) protein (242aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014};; Phosphoribosylform
hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=2 Tax=Bifidobacterium dentium RepID=E0Q5C3_9BIFI rbh
NECEvent2014_3_3_scaffold_414_7
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6047..6694)
DNA (648bp) protein (216aa)
hisH; imidazole glycerol phosphate synthase subunit hisH (EC:6.3.5.3) rbh
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-
Imidazole glycerol phosphate synthase subunit HisH n=4 Tax=Bifidobacterium dentium RepID=D2Q5F8_BIFDB rbh
NECEvent2014_3_3_scaffold_414_8
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6736..7428)
DNA (693bp) protein (231aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1S750_9BIFI rbh
hypothetical protein
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27495.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium
NECEvent2014_3_3_scaffold_414_9
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7428..8027)
DNA (600bp) protein (200aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, E
imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase n=2 Tax=Bifidobacterium dentium RepID=E0Q5C0_9BIFI rbh
NECEvent2014_3_3_scaffold_414_10
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8054..9229)
DNA (1176bp) protein (392aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID
hisC; histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase n=2 Tax=Bifidobacterium dentium RepID=D2Q5G1_BIFDB rbh
NECEvent2014_3_3_scaffold_414_11
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9226..10755)
DNA (1530bp) protein (510aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|RuleBase:RU000580}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|RuleB
hisD; histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GZR8_9BIFI rbh
NECEvent2014_3_3_scaffold_414_12
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10843..11769
DNA (927bp) protein (309aa)
Permease MFS superfamily n=2 Tax=Bifidobacterium dentium RepID=D2Q5G3_BIFDB rbh
Transporter, major facilitator family protein {ECO:0000313|EMBL:ETO95794.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidoba
MFS superfamily permease
Displaying 12 items

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