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NECEvent2014_3_3_scaffold_437

Alias: 173_001_scaffold_437

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_3_scaffold_437_1
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1..513
DNA (513bp) protein (171aa)
two-component system response regulator (EC:3.1.1.61)
Two-component system response regulator n=4 Tax=Bifidobacterium dentium RepID=D2Q9Z7_BIFDB rbh
Response regulator receiver domain protein {ECO:0000313|EMBL:ETO98564.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacte
NECEvent2014_3_3_scaffold_437_2
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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503..3355
DNA (2853bp) protein (951aa)
DNA-directed DNA polymerase {ECO:0000313|EMBL:ETO98556.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ETO98556.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobact
polA; DNA polymerase I (EC:2.7.7.7)
DNA-directed DNA polymerase n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q6X5_9BIFI rbh
NECEvent2014_3_3_scaffold_437_3
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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3381..4286
DNA (906bp) protein (302aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1161409 species="Bacteri
Putative GTP cyclohydrolase 1 type 2 n=2 Tax=Bifidobacterium dentium RepID=D2Q9Z9_BIFDB rbh
hypothetical protein
NECEvent2014_3_3_scaffold_437_4
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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4289..4915
DNA (627bp) protein (209aa)
phosphohydrolase (EC:3.6.1.13)
Hydrolase, NUDIX family n=2 Tax=Bifidobacterium dentium RepID=E0Q6X3_9BIFI rbh
NUDIX domain protein {ECO:0000313|EMBL:ETO98589.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
NECEvent2014_3_3_scaffold_437_5
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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5015..7138
DNA (2124bp) protein (708aa)
glgX; glycogen operon protein GlgX (EC:2.4.1.18)
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae
Glycogen operon protein GlgX n=2 Tax=Bifidobacterium dentium RepID=D2QA01_BIFDB rbh
NECEvent2014_3_3_scaffold_437_6
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(7211..8380)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q6X1_9BIFI rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFM41486.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27
NECEvent2014_3_3_scaffold_437_trna_1
unknown

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8486..8559
DNA (74bp)
transferRNA
NECEvent2014_3_3_scaffold_437_7
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8755..10107
DNA (1353bp) protein (451aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyru
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=2 Tax=Bifidobacterium dentium RepID=E0Q6T2_9BIFI rbh
NECEvent2014_3_3_scaffold_437_8
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10133..11116)
DNA (984bp) protein (328aa)
Restriction endonuclease n=2 Tax=Bifidobacterium dentium RepID=D2QA04_BIFDB rbh
Restriction endonuclease {ECO:0000313|EMBL:ETO98606.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
restriction endonuclease
Displaying 9 items

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