ggKbase home page

NECEvent2014_3_3_scaffold_473

Alias: 173_001_scaffold_473

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_3_scaffold_473_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..401)
DNA (399bp) protein (133aa)
Single-stranded DNA-binding protein n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2MFL4_BIFBI
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1207543 species="Bacteria; Actinobacteria; Bif
Ssb Single-strand DNA-binding protein
NECEvent2014_3_3_scaffold_473_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(404..757)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2IQC4_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKE50975.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13
hypothetical protein
NECEvent2014_3_3_scaffold_473_3
unknown

Not on your lists

comp(754..1188)
DNA (435bp) protein (145aa)

This feature has no annotations

NECEvent2014_3_3_scaffold_473_4
Bifidobacterium ruminantium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1181..1657)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A5A9_BIFAD
Uncharacterized protein {ECO:0000313|EMBL:KFI90648.1}; TaxID=78346 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium ruminantium.;"
hypothetical protein
NECEvent2014_3_3_scaffold_473_5
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1654..1860)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H6S7_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEF28047.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenula
NECEvent2014_3_3_scaffold_473_6
Bifidobacterium moukalabense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1865..2083)
DNA (219bp) protein (73aa)
Uncharacterized protein {ECO:0000313|EMBL:ETY72245.1}; TaxID=1435051 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium moukalabense D
NECEvent2014_3_3_scaffold_473_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2203..2445
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2IQB9_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKE50970.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13
hypothetical protein
NECEvent2014_3_3_scaffold_473_8

Not on your lists

2458..3168
DNA (711bp) protein (237aa)
Uncharacterized protein n=2 Tax=root RepID=I3NLD1_9VIRU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADD65748.1}; TaxID=743964 species="Viruses; unclassified phages.;" source="Bifidobacterium phage Bbif-1.;"
NECEvent2014_3_3_scaffold_473_9
unknown

Not on your lists

comp(3092..3376)
DNA (285bp) protein (95aa)

This feature has no annotations

NECEvent2014_3_3_scaffold_473_10
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3394..3660)
DNA (267bp) protein (89aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE05724.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
NECEvent2014_3_3_scaffold_473_11
Bifidobacterium thermacidophilum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3707..4180
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GR03_BIFLS
Uncharacterized protein {ECO:0000313|EMBL:KFJ00134.1}; TaxID=212365 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium thermacidophilu
hypothetical protein
NECEvent2014_3_3_scaffold_473_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4200..4904
DNA (705bp) protein (235aa)
RlfA phagic protein n=3 Tax=root RepID=E4P1I8_BIFBP rbh
rlfA; phagic protein
Uncharacterized protein {ECO:0000313|EMBL:EFR50267.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 4
NECEvent2014_3_3_scaffold_473_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4901..5416
DNA (516bp) protein (172aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=E4V9H4_BIFBI rbh
Uncharacterized protein {ECO:0000313|EMBL:EFR50266.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 4
phage P1-like protein
NECEvent2014_3_3_scaffold_473_14

Not on your lists

5535..5987
DNA (453bp) protein (151aa)
Uncharacterized protein n=2 Tax=root RepID=I3NLD5_9VIRU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADD65752.1}; TaxID=743964 species="Viruses; unclassified phages.;" source="Bifidobacterium phage Bbif-1.;"
NECEvent2014_3_3_scaffold_473_15
unknown

Not on your lists

6032..6244
DNA (213bp) protein (71aa)

This feature has no annotations

NECEvent2014_3_3_scaffold_473_16
Bifidobacterium mongoliense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6320..7156
DNA (837bp) protein (279aa)
DNA polymerase III polC-type n=1 Tax=Bifidobacterium thermophilum RBL67 RepID=M4RFC5_9BIFI
TM2 domain-containing protein {ECO:0000313|EMBL:KFI76575.1}; TaxID=1437603 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium mongolie
DNA polymerase III polC-type
NECEvent2014_3_3_scaffold_473_17
unknown

Not on your lists

comp(7232..7648)
DNA (417bp) protein (139aa)

This feature has no annotations

NECEvent2014_3_3_scaffold_473_18
Actinomyces georgiae, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7645..8175)
DNA (531bp) protein (177aa)
PF06114 domain protein n=1 Tax=Actinomyces georgiae F0490 RepID=J1GQV7_9ACTO
PF06114 domain protein {ECO:0000313|EMBL:EJF35283.1}; TaxID=1125717 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces georgiae F0490.;"
hypothetical protein
NECEvent2014_3_3_scaffold_473_19
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8351..8878)
DNA (528bp) protein (176aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ15405.1}; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense
NECEvent2014_3_3_scaffold_473_20
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9090..9704)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XUV1_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEB21937.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM
hypothetical protein
NECEvent2014_3_3_scaffold_473_21
Bifidobacterium moukalabense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9952..10455
DNA (504bp) protein (168aa)
Site-specific recombinase, phage integrase family n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BRZ6_BIFBR
Integrase {ECO:0000313|EMBL:ETY72256.1}; TaxID=1435051 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium moukalabense DSM 27321.;"
phage integrase
Displaying 21 items

View Taxonomy