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NECEvent2014_3_3_scaffold_487

Alias: 173_001_scaffold_487

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_3_scaffold_487_1
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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140..3466
DNA (3327bp) protein (1109aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=1 Tax=Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1) RepID=D2Q5M2_BIFDB rbh
NECEvent2014_3_3_scaffold_487_2
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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4019..5191
DNA (1173bp) protein (391aa)
ATPase n=2 Tax=Bifidobacterium dentium RepID=D2Q5M1_BIFDB rbh
AAA domain protein {ECO:0000313|EMBL:ETO95715.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
ATPase
NECEvent2014_3_3_scaffold_487_3
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5593..6366
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S6N0_9BIFI rbh
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27550.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium
CRISPR-associated Csh2 family protein
NECEvent2014_3_3_scaffold_487_4
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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6402..7079
DNA (678bp) protein (226aa)
CRISPR-associated protein Cas4 n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S6N1_9BIFI rbh
CRISPR-associated protein Cas4 {ECO:0000313|EMBL:KEF28021.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudoc
CRISPR-associated protein Cas4
NECEvent2014_3_3_scaffold_487_5
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7094..8125
DNA (1032bp) protein (344aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteria
CRISPR-associated endonuclease Cas1 n=2 Tax=Bifidobacterium dentium RepID=D2Q5L7_BIFDB rbh
cas1; CRISPR-associated protein Cas1
NECEvent2014_3_3_scaffold_487_6
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8132..8422
DNA (291bp) protein (97aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobact
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S6N3_9BIFI
CRISPR-associated protein Cas2
NECEvent2014_3_3_scaffold_487_7
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8608..9000)
DNA (393bp) protein (131aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1) RepID=D2Q5L6_BIFDB
Uncharacterized protein {ECO:0000313|EMBL:ADB10231.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain
hypothetical protein
NECEvent2014_3_3_scaffold_487_8
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9776..10234)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BSJ1_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG71141.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulat
Displaying 8 items

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