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NECEvent2014_3_3_scaffold_573

Alias: 173_001_scaffold_573

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_3_scaffold_573_1
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2..352
DNA (351bp) protein (117aa)
araD; L-ribulose-5-phosphate 4-epimerase (EC:4.1.2.17)
L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:ETO96612.1}; EC=5.1.3.4 {ECO:0000313|EMBL:ETO96612.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bif
L-ribulose-5-phosphate 4-epimerase n=4 Tax=Bifidobacterium dentium RepID=D2Q6D6_BIFDB
NECEvent2014_3_3_scaffold_573_2
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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440..1957
DNA (1518bp) protein (506aa)
L-arabinose isomerase {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909}; EC=5.3.1.4 {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909};; TaxID=1161409 species="Bacteria; A
araA; L-arabinose isomerase (EC:5.3.1.4)
L-arabinose isomerase n=2 Tax=Bifidobacterium dentium RepID=D2Q6D5_BIFDB rbh
NECEvent2014_3_3_scaffold_573_3
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2405..3340)
DNA (936bp) protein (312aa)
iunH; inosine-uridine preferring nucleoside hydrolase (EC:3.2.2.3)
Inosine-uridine preferring nucleoside hydrolase n=1 Tax=Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1) RepID=D2Q6D4_BIFDB rbh
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27806.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium
NECEvent2014_3_3_scaffold_573_4
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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3459..4469
DNA (1011bp) protein (337aa)
Transcriptional regulator, LacI family n=2 Tax=Bifidobacterium dentium RepID=D2Q6D3_BIFDB rbh
LacI family transcriptional regulator
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27805.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium
NECEvent2014_3_3_scaffold_573_5
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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4770..6191
DNA (1422bp) protein (474aa)
Multidrug resistance protein B (MFS family transporter) n=2 Tax=Bifidobacterium dentium RepID=D2Q6D2_BIFDB rbh
Transporter, major facilitator family protein {ECO:0000313|EMBL:ETO96566.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidoba
multidrug resistance protein B
NECEvent2014_3_3_scaffold_573_6
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(6437..8365)
DNA (1929bp) protein (643aa)
AMP-binding enzyme n=2 Tax=Bifidobacterium dentium RepID=E0Q4I2_9BIFI rbh
AMP-binding enzyme {ECO:0000313|EMBL:EFM42550.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;
fadD; long-chain-fatty-acid--CoA ligase rbh
Displaying 6 items

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