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NECEvent2014_3_3_scaffold_687

Alias: 173_001_scaffold_687

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_3_scaffold_687_1
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..2617)
DNA (2616bp) protein (872aa)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; TaxID=401473 species="Bacteria; Actinobacteria; Bifi
acn; acn aconitate hydratase (EC:4.2.1.3)
Acn Aconitate hydratase n=2 Tax=Bifidobacterium dentium RepID=D2QB65_BIFDB rbh
NECEvent2014_3_3_scaffold_687_2
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2689..5151)
DNA (2463bp) protein (821aa)
ctpE; cation-transporting ATPase (EC:3.6.3.12)
E1-E2 ATPase n=2 Tax=Bifidobacterium dentium RepID=E1N9H6_9BIFI rbh
E1-E2 ATPase {ECO:0000313|EMBL:ETO96324.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
NECEvent2014_3_3_scaffold_687_3
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5253..5828)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q5L2_9BIFI rbh
Putative lipoprotein {ECO:0000313|EMBL:ETO96109.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
sugar ABC transporter substrate-binding protein
NECEvent2014_3_3_scaffold_687_4
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5825..7090)
DNA (1266bp) protein (422aa)
tRNA (uracil-5-) -methyltransferase (EC:2.1.1.35)
tRNA (Uracil-5-)-methyltransferase n=2 Tax=Bifidobacterium dentium RepID=D2Q569_BIFDB rbh
TRAM domain protein {ECO:0000313|EMBL:ETO96320.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
NECEvent2014_3_3_scaffold_687_5
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7090..7803)
DNA (714bp) protein (238aa)
ABC-type Mn2+/Zn2+ transport systems, permease components n=2 Tax=Bifidobacterium dentium RepID=D2Q570_BIFDB rbh
Mn2+/Zn2+ ABC transporter permease
ABC-type Mn2+/Zn2+ transport systems, permease components {ECO:0000313|EMBL:ADB10085.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" sourc
NECEvent2014_3_3_scaffold_687_6
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7826..8647)
DNA (822bp) protein (274aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S801_9BIFI rbh
hypothetical protein
PF12502 family protein {ECO:0000313|EMBL:ETO96224.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
NECEvent2014_3_3_scaffold_687_7
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8745..9467)
DNA (723bp) protein (241aa)
xth; exodeoxyribonuclease III (EC:4.2.99.18)
Putative exodeoxyribonuclease III n=3 Tax=Bifidobacterium dentium RepID=B1S800_9BIFI rbh
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27408.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium
NECEvent2014_3_3_scaffold_687_8
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9424..9582)
DNA (159bp) protein (53aa)
Putative exodeoxyribonuclease III {ECO:0000313|EMBL:EFM41932.1}; EC=3.1.11.2 {ECO:0000313|EMBL:EFM41932.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifi
Putative exodeoxyribonuclease III n=3 Tax=Bifidobacterium dentium RepID=B1S800_9BIFI
exodeoxyribonuclease
NECEvent2014_3_3_scaffold_687_9
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9811..11820)
DNA (2010bp) protein (670aa)
OppD2 Oligopeptide transport ATP-binding protein oppD {ECO:0000313|EMBL:ADB10088.1}; EC=3.6.3.30 {ECO:0000313|EMBL:ADB10088.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifi
oppD2; peptide ABC transporter ATP-binding protein (EC:3.6.3.30) rbh
OppD2 Oligopeptide transport ATP-binding protein oppD n=4 Tax=Bifidobacterium dentium RepID=D2Q573_BIFDB rbh
NECEvent2014_3_3_scaffold_687_10
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11841..12371)
DNA (531bp) protein (177aa)
ABC transporter, permease protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5K6_9BIFI rbh
oppC1; peptide ABC transporter permease
OppC1 Oligopeptide transport system permease protein oppC {ECO:0000313|EMBL:ADB10089.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" sourc
Displaying 10 items

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