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NECEvent2014_3_3_scaffold_713

Alias: 173_001_scaffold_713

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_3_scaffold_713_1
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..97)
DNA (96bp) protein (32aa)
ABC transporter ATP-binding protein (EC:3.6.3.31)
ABC transporter n=2 Tax=Bifidobacterium dentium RepID=D2QAA2_BIFDB
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ETO95602.1}; Flags: Fragment;; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source=
NECEvent2014_3_3_scaffold_713_2
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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273..866
DNA (594bp) protein (198aa)
Transcriptional regulator, TetR family n=2 Tax=Bifidobacterium dentium RepID=D2QAA1_BIFDB rbh
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ADB09737.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium
NECEvent2014_3_3_scaffold_713_3
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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989..1768
DNA (780bp) protein (260aa)
peptidase C26 (EC:6.3.5.2)
Peptidase C26 n=2 Tax=Bifidobacterium dentium RepID=D2QAA0_BIFDB rbh
Peptidase C26 {ECO:0000313|EMBL:ETO98603.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
NECEvent2014_3_3_scaffold_713_4
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1855..2490
DNA (636bp) protein (212aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 (EC:3.8.1.2)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=4 Tax=Bifidobacterium dentium RepID=D2QA99_BIFDB rbh
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:ETO98566.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp
NECEvent2014_3_3_scaffold_713_5
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2608..3540
DNA (933bp) protein (311aa)
Transcriptional regulator, LysR family n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1SAS5_9BIFI rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ETO98596.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium
LysR family transcriptional regulator
NECEvent2014_3_3_scaffold_713_6
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3598..4290)
DNA (693bp) protein (231aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=2 Tax=Bifidobacterium dentium RepID=E0Q6H7_9BIFI rbh
NECEvent2014_3_3_scaffold_713_7
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4319..5320)
DNA (1002bp) protein (334aa)
Dihydroorotate dehydrogenase n=4 Tax=Bifidobacterium dentium RepID=D2QA97_BIFDB rbh
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule
pyrD; dihydroorotate dehydrogenase
NECEvent2014_3_3_scaffold_713_8
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5277..6095)
DNA (819bp) protein (273aa)
dihydroorotate dehydrogenase electron transfer subunit (EC:1.6.2.2)
Oxidoreductase NAD-binding domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q6H9_9BIFI rbh
Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B {ECO:0000313|EMBL:ETO98623.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacter
NECEvent2014_3_3_scaffold_713_9
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6166..7128)
DNA (963bp) protein (321aa)
pyrF; Orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032256}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032220};; OMP decarboxylase
Orotidine 5'-phosphate decarboxylase n=2 Tax=Bifidobacterium dentium RepID=D2QA95_BIFDB rbh
NECEvent2014_3_3_scaffold_713_10
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7128..7445)
DNA (318bp) protein (106aa)
pyrC; dihydroorotase (EC:3.5.2.3)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=1161409 species="
Dihydroorotase n=2 Tax=Bifidobacterium dentium RepID=D2QA94_BIFDB
Displaying 10 items

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