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NECEvent2014_3_3_scaffold_734

Alias: 173_001_scaffold_734

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_3_scaffold_734_1
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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185..2218
DNA (2034bp) protein (678aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:000
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase n=2 Tax=Bifidobacterium dentium RepID=E0Q699_9BIFI rbh
NECEvent2014_3_3_scaffold_734_2
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2322..2987
DNA (666bp) protein (222aa)
PgsA2 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=3 Tax=Bifidobacterium dentium RepID=D2QAH3_BIFDB rbh
pgsA2; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:ETO96314.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp
NECEvent2014_3_3_scaffold_734_3
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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3040..3996
DNA (957bp) protein (319aa)
Lipid A biosynthesis (KDO)2-(Lauroyl)-lipid IVA acyltransferase n=2 Tax=Bifidobacterium dentium RepID=E1N7Z6_9BIFI rbh
Lipid A biosynthesis (KDO)2-(Lauroyl)-lipid IVA acyltransferase domain protein {ECO:0000313|EMBL:ETO96372.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bi
branched-chain amino acid transport ATP-binding protein
NECEvent2014_3_3_scaffold_734_4
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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3953..5194
DNA (1242bp) protein (414aa)
capsular polysaccharide biosynthesis protein (EC:2.4.1.57)
Glycosyltransferase, group 1 family protein n=2 Tax=Bifidobacterium dentium RepID=E0Q6A2_9BIFI rbh
Putative GDP-mannose-dependent alpha-(1-2)-phosphatidylinositol mannosyltransferase {ECO:0000313|EMBL:ETO96118.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriacea
NECEvent2014_3_3_scaffold_734_5
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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5248..6003
DNA (756bp) protein (252aa)
Probable transcriptional regulatory protein BDP_1178 n=4 Tax=Bifidobacterium dentium RepID=D2QAH0_BIFDB rbh
hypothetical protein
Probable transcriptional regulatory protein BBDE_1124 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" sour
NECEvent2014_3_3_scaffold_734_6
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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6010..6591
DNA (582bp) protein (194aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday
ruvC; Crossover junction endodeoxyribonuclease ruvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=4 Tax=Bifidobacterium dentium RepID=D2QAG9_BIFDB rbh
NECEvent2014_3_3_scaffold_734_7
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6636..7253
DNA (618bp) protein (206aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1SA85_9BIFI rbh
holliday junction ATP-dependent DNA helicase ruvA
Displaying 7 items

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