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NECEvent2014_3_3_scaffold_854

Alias: 173_001_scaffold_854

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_3_scaffold_854_1
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1..906
DNA (906bp) protein (302aa)
Cystathionine beta-lyase {ECO:0000313|EMBL:ETO98361.1}; EC=4.4.1.8 {ECO:0000313|EMBL:ETO98361.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacteri
Cys/Met metabolism PLP-dependent enzyme n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S4U0_9BIFI rbh
cystathionine gamma-synthase
NECEvent2014_3_3_scaffold_854_2
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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924..2885
DNA (1962bp) protein (654aa)
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:ETO98182.1}; EC=3.6.4.12 {ECO:0000313|EMBL:ETO98182.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifid
RecQ ATP-dependent DNA helicase recQ n=2 Tax=Bifidobacterium dentium RepID=D2Q950_BIFDB rbh
recQ; ATP-dependent DNA helicase RecQ
NECEvent2014_3_3_scaffold_854_3
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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3021..3506
DNA (486bp) protein (162aa)
luxS; autoinducer-2 production protein luxS (EC:4.4.1.21)
S-ribosylhomocysteine lyase {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059628};; AI-2 synthesis protein {ECO
S-ribosylhomocysteine lyase n=2 Tax=Bifidobacterium dentium RepID=D2Q952_BIFDB rbh
NECEvent2014_3_3_scaffold_854_4
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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3702..4229
DNA (528bp) protein (176aa)
CysE Serine O-acetyltransferase n=1 Tax=Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1) RepID=D2Q953_BIFDB rbh
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ26640.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium
cysE; serine O-acetyltransferase
NECEvent2014_3_3_scaffold_854_5
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(4267..5694)
DNA (1428bp) protein (476aa)
Amino acid transporter n=3 Tax=Bifidobacterium dentium RepID=B1S539_9BIFI rbh
Amino acid transporter {ECO:0000313|EMBL:EFM40982.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 276
amino acid permease
NECEvent2014_3_3_scaffold_854_6
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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5929..6261
DNA (333bp) protein (111aa)
alr; alanine racemase (EC:5.1.1.1)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=401473 species="Bacteria; Actinob
Alanine racemase n=1 Tax=Bifidobacterium dentium JCVIHMP022 RepID=E1NCV9_9BIFI
Displaying 6 items

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