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NECEvent2014_3_3_scaffold_1656

Alias: 173_001_scaffold_1656

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_3_scaffold_1656_1
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..319)
DNA (318bp) protein (106aa)
UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208, ECO:0000256|SAAS:SAAS00085409}; EC=6.3.2.- {ECO:0000256|HAMAP-Rule:MF_00208, ECO:0000256|SAAS:SAAS00276926};; UDP-MurNAc-tri
mur; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--lysine ligase (EC:6.3.2.13)
UDP-N-acetylmuramyl-tripeptide synthetase n=3 Tax=Bifidobacterium dentium RepID=E0Q5H9_9BIFI
NECEvent2014_3_3_scaffold_1656_2
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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467..1078
DNA (612bp) protein (204aa)
SigH RNA polymerase ECF-type sigma factor n=4 Tax=Bifidobacterium dentium RepID=D2Q5A2_BIFDB rbh
Sigma-70 region 2 {ECO:0000313|EMBL:EFM41904.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
sigH; sigH RNA polymerase ECF-type sigma factor rbh
NECEvent2014_3_3_scaffold_1656_3
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1075..1320
DNA (246bp) protein (82aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1S7L4_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB10116.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain
NECEvent2014_3_3_scaffold_1656_4
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1545..2498)
DNA (954bp) protein (318aa)
aldose 1-epimerase (EC:5.1.3.3) rbh
Aldose 1-epimerase n=4 Tax=Bifidobacterium dentium RepID=D2Q5A0_BIFDB rbh
Aldose 1-epimerase {ECO:0000313|EMBL:ETO96858.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
NECEvent2014_3_3_scaffold_1656_5
unknown

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2581..2748
DNA (168bp) protein (56aa)

This feature has no annotations

NECEvent2014_3_3_scaffold_1656_6
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2745..3230
DNA (486bp) protein (162aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxI
ispH; ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=2 Tax=Bifidobacterium dentium RepID=E0Q5I3_9BIFI rbh
Displaying 6 items

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