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NECEvent2014_3_3_scaffold_239_18

Organism: NECEvent2014_3_3_Bifidobacterium_MSTE12-rel_59_9

near complete RP 52 / 55 MC: 6 BSCG 49 / 51 ASCG 14 / 38
Location: comp(23335..23724)

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock DNA-binding domain protein n=3 Tax=Bifidobacterium RepID=B6XX10_9BIFI similarity UNIREF
DB: UNIREF100
  • Identity: 94.6
  • Coverage: 129.0
  • Bit_score: 247
  • Evalue 1.00e-62
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:EFM41819.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium d similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 129.0
  • Bit_score: 257
  • Evalue 8.00e-66
cold-shock protein similarity KEGG
DB: KEGG
  • Identity: 94.6
  • Coverage: 129.0
  • Bit_score: 247
  • Evalue 2.80e-63

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Taxonomy

Bifidobacterium dentium → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 390
ATGCCTAGCGGACGCGTTCGTTGGTTTGATACGAACAAAGGCTATGGATTCATTCAGAACGAGCAGGGCGCCGATGTGTTTCTGCCCGCCGTTGCGTTGCCCGAAGGCGTGAAGACGCTGCGTAAGGGCGCGAAGGTCGAATACTCCGTAATCGAAGGGCGTAGGGGACCTCAGGCGATGAACGTGACATTGGTCGCATCGGCCCCGTCACTGGTCAAGGCCACCCGACCGAAGCCGGATGACATGGCCGCCATCGTCGAGGATTTGATCAAGTTGCTGGATTCCGCAGGGAACCAGTTGCGTCGACATCGCTACCCTTCGCCGGCCGAAAGCAAGAAGCTGGCCACGCTGATGCGTGCCGTTGCCGATAATTTCGACGTACAGGACTGA
PROTEIN sequence
Length: 130
MPSGRVRWFDTNKGYGFIQNEQGADVFLPAVALPEGVKTLRKGAKVEYSVIEGRRGPQAMNVTLVASAPSLVKATRPKPDDMAAIVEDLIKLLDSAGNQLRRHRYPSPAESKKLATLMRAVADNFDVQD*