ggKbase home page

NECEvent2014_3_3_scaffold_239

Alias: 173_001_scaffold_239

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_3_scaffold_239_1
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..304)
DNA (303bp) protein (101aa)
Transporter, major facilitator family protein n=2 Tax=Bifidobacterium dentium RepID=E0Q7T4_9BIFI
Transporter, major facilitator family protein {ECO:0000313|EMBL:EFM41799.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobac
MFS family major facilitator transporter
NECEvent2014_3_3_scaffold_239_2
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(431..1807)
DNA (1377bp) protein (459aa)
ATPase, AAA family {ECO:0000313|EMBL:EFM41800.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EFM41800.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" s
ATPase AAA (EC:3.4.21.53)
ATPase, AAA family n=2 Tax=Bifidobacterium dentium RepID=E0Q7T5_9BIFI rbh
NECEvent2014_3_3_scaffold_239_3
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1892..4450
DNA (2559bp) protein (853aa)
DEAD/DEAH box helicase n=2 Tax=Bifidobacterium dentium RepID=E0Q7T6_9BIFI rbh
PF12029 domain protein {ECO:0000313|EMBL:ETO97817.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
DEAD/DEAH box-like helicase
NECEvent2014_3_3_scaffold_239_4
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4462..5457)
DNA (996bp) protein (332aa)
Polyphosphate:nucleotide phosphotransferase, PPK2 family {ECO:0000313|EMBL:ETO97737.1}; EC=2.7.4.- {ECO:0000313|EMBL:ETO97737.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; B
Polyphosphate:nucleotide phosphotransferase, PPK2 family n=2 Tax=Bifidobacterium dentium RepID=E0Q7T7_9BIFI rbh
hypothetical protein
NECEvent2014_3_3_scaffold_239_5
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5550..6683)
DNA (1134bp) protein (378aa)
Glutamate transport system permease protein GluD n=2 Tax=Bifidobacterium dentium RepID=D2Q9G6_BIFDB rbh
ABC transporter, permease protein {ECO:0000313|EMBL:ETO97877.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp.
gluD; glutamate transporter permease gluD
NECEvent2014_3_3_scaffold_239_6
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6690..7367)
DNA (678bp) protein (226aa)
Permease protein of ABC transporter for glutamate n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0X9_BIFAA rbh
ABC transporter, permease protein {ECO:0000313|EMBL:ETO97788.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp.
permease protein of ABC transporter for glutamate
NECEvent2014_3_3_scaffold_239_7
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7371..8213)
DNA (843bp) protein (281aa)
Glutamate-binding protein of ABC transporter system n=3 Tax=Bifidobacterium RepID=A1A0X8_BIFAA rbh
ABC transporter, substrate-binding protein, family 3 {ECO:0000313|EMBL:ETO97873.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="B
glutamate-binding protein of ABC transporter system
NECEvent2014_3_3_scaffold_239_8
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8246..9043)
DNA (798bp) protein (266aa)
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFM41806.1}; EC=3.6.3.- {ECO:0000313|EMBL:EFM41806.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bi
ABC transporter, ATP-binding protein n=3 Tax=Bifidobacterium dentium RepID=E0Q7U1_9BIFI rbh
glutamate ABC transporter ATP-binding protein rbh
NECEvent2014_3_3_scaffold_239_9
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9364..10158)
DNA (795bp) protein (265aa)
glutamate transport ATP-binding protein gluA (EC:3.6.3.31)
Glutamate transport ATP-binding protein gluA n=2 Tax=Bifidobacterium dentium RepID=D2Q9G1_BIFDB rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ETO97896.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium s
NECEvent2014_3_3_scaffold_239_10
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10155..11699)
DNA (1545bp) protein (515aa)
ABC transporter permease (EC:4.2.1.91) rbh
Permease protein of ABC transporter system n=4 Tax=Bifidobacterium dentium RepID=D2Q9G0_BIFDB rbh
ABC transporter, permease protein {ECO:0000313|EMBL:EFM41809.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium denti
NECEvent2014_3_3_scaffold_239_11
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(11855..13654)
DNA (1800bp) protein (600aa)
Aspartate--tRNA ligase {ECO:0000313|EMBL:ETO97846.1}; EC=6.1.1.- {ECO:0000313|EMBL:ETO97846.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium
Aspartate--tRNA ligase n=3 Tax=Bifidobacterium dentium RepID=B1S647_9BIFI rbh
aspartyl-tRNA synthetase
NECEvent2014_3_3_scaffold_239_12
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(13717..15108)
DNA (1392bp) protein (464aa)
Histidine--tRNA ligase {ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|SAAS:SAAS00043629};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobact
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Bifidobacterium dentium JCVIHMP022 RepID=E1NAV0_9BIFI rbh
NECEvent2014_3_3_scaffold_239_13
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15226..16662
DNA (1437bp) protein (479aa)
ATPase involved in DNA repair n=2 Tax=Bifidobacterium dentium RepID=D2Q9F7_BIFDB rbh
PF03993 domain protein {ECO:0000313|EMBL:ETO97832.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
DNA repair ATPase
NECEvent2014_3_3_scaffold_239_14
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17115..18110
DNA (996bp) protein (332aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q7U9_9BIFI rbh
Uncharacterized protein {ECO:0000313|EMBL:EFM41814.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27
hypothetical protein rbh
NECEvent2014_3_3_scaffold_239_15
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18285..20867)
DNA (2583bp) protein (861aa)
ATPase family associated with various cellular activities (AAA) n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S653_9BIFI rbh
Clp amino terminal domain protein {ECO:0000313|EMBL:ETO97801.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp.
clpC; Negative regulator of genetic competence clpC/mecB
NECEvent2014_3_3_scaffold_239_16
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21007..22026
DNA (1020bp) protein (340aa)
UspA domain protein n=3 Tax=Bifidobacterium dentium RepID=D2Q9F4_BIFDB rbh
uspA; UspA domain protein
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ26740.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium
NECEvent2014_3_3_scaffold_239_17
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22165..23331)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q7V3_9BIFI rbh
PF11228 family protein {ECO:0000313|EMBL:ETO97760.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein rbh
NECEvent2014_3_3_scaffold_239_18
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23335..23724)
DNA (390bp) protein (130aa)
Cold-shock DNA-binding domain protein n=3 Tax=Bifidobacterium RepID=B6XX10_9BIFI
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:EFM41819.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium d
cold-shock protein
NECEvent2014_3_3_scaffold_239_19
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23889..24350)
DNA (462bp) protein (154aa)
two component system histidine kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
Two component system histidine kinase n=1 Tax=Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1) RepID=D2Q9F1_BIFDB
Displaying 19 items

View Taxonomy