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NECEvent2014_3_3_Bifidobacterium_MSTE12-rel_59_9

NECEvent2014_3_3_Bifidobacterium_58_10
In projects: NECEvent2014_3_3

Consensus taxonomy: Bifidobacterium  →  Bifidobacteriales  →  Actinobacteria  →  Actinobacteria  →  Bacteria

Displaying items 201-239 of 239 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_3_3_scaffold_687 173_001_scaffold_687
Species: Bifidobacterium dentium (60%)
10 12371 bp 60.02 8.14 96.03
NECEvent2014_3_3_scaffold_2202 173_001_scaffold_2202
Species: Bifidobacterium sp. MSTE12 (100%)
4 2425 bp 58.89 4.95 96.12
NECEvent2014_3_3_scaffold_3070 173_001_scaffold_3070
Species: Bifidobacterium dentium (66.67%)
3 1747 bp 57.47 8.24 96.34
NECEvent2014_3_3_scaffold_2084 173_001_scaffold_2084
Species: Bifidobacterium dentium (100%)
3 2537 bp 59.09 9.34 96.49
NECEvent2014_3_3_scaffold_2266 173_001_scaffold_2266
Species: Bifidobacterium dentium (50%)
2 2359 bp 61.59 8.46 96.52
NECEvent2014_3_3_scaffold_1575 173_001_scaffold_1575
Species: Bifidobacterium dentium (75%)
4 3405 bp 58.83 8.19 96.56
NECEvent2014_3_3_scaffold_2613 173_001_scaffold_2613
Species: Bifidobacterium kashiwanohense (100%)
3 2062 bp 56.55 7.71 97.04
NECEvent2014_3_3_scaffold_2145 173_001_scaffold_2145
Species: Bifidobacterium dentium (66.67%)
3 2475 bp 58.46 9.03 97.09
NECEvent2014_3_3_scaffold_1884 173_001_scaffold_1884
Species: Bifidobacterium dentium (66.67%)
3 2819 bp 60.70 8.94 97.16
NECEvent2014_3_3_scaffold_2656 173_001_scaffold_2656
Species: Bifidobacterium moukalabense (50%)
4 2020 bp 64.01 10.02 97.57
NECEvent2014_3_3_scaffold_1457 173_001_scaffold_1457
Species: Bifidobacterium dentium (75%)
4 3675 bp 59.40 11.76 97.63
NECEvent2014_3_3_scaffold_2584 173_001_scaffold_2584
Species: Bifidobacterium dentium (50%)
2 2080 bp 58.46 7.79 97.64
NECEvent2014_3_3_scaffold_2318 173_001_scaffold_2318
Species: Bifidobacterium sp. MSTE12 (100%)
2 2312 bp 64.92 8.17 97.71
NECEvent2014_3_3_scaffold_1047 173_001_scaffold_1047
Species: Bifidobacterium sp. MSTE12 (100%)
3 5004 bp 58.61 8.75 97.72
NECEvent2014_3_3_scaffold_2307 173_001_scaffold_2307
Species: Bifidobacterium dentium (100%)
1 2324 bp 60.54 8.71 97.85
NECEvent2014_3_3_scaffold_1570 173_001_scaffold_1570
Species: Bifidobacterium sp. MSTE12 (66.67%)
3 3416 bp 60.28 10.36 98.01
NECEvent2014_3_3_scaffold_698 173_001_scaffold_698
Species: Bifidobacterium dentium (80%)
10 7556 bp 57.21 8.12 98.03
NECEvent2014_3_3_scaffold_699 173_001_scaffold_699
Species: Bifidobacterium scardovii (70%)
10 7539 bp 63.68 8.44 98.17
NECEvent2014_3_3_scaffold_2593 173_001_scaffold_2593
Species: Bifidobacterium dentium (100%)
2 2072 bp 52.80 5.65 98.31
NECEvent2014_3_3_scaffold_1482 173_001_scaffold_1482
Species: Bifidobacterium sp. MSTE12 (66.67%)
3 3613 bp 62.16 9.51 98.39
NECEvent2014_3_3_scaffold_4582 173_001_scaffold_4582
Species: Bifidobacterium dentium (66.67%)
3 1129 bp 57.93 6.91 98.58
NECEvent2014_3_3_scaffold_1179 173_001_scaffold_1179
Species: Bifidobacterium sp. MSTE12 (60%)
5 4452 bp 58.49 8.79 98.72
NECEvent2014_3_3_scaffold_1124 173_001_scaffold_1124
Species: Bifidobacterium dentium (80%)
5 4665 bp 61.67 9.07 98.84
NECEvent2014_3_3_scaffold_1063 173_001_scaffold_1063
Species: Bifidobacterium catenulatum (60%)
5 4915 bp 61.61 7.23 98.88
NECEvent2014_3_3_scaffold_634 173_001_scaffold_634
Species: Bifidobacterium sp. MSTE12 (71.43%)
7 8247 bp 60.52 9.66 98.91
NECEvent2014_3_3_scaffold_544 173_001_scaffold_544
Species: Bifidobacterium sp. MSTE12 (100%)
1 9310 bp 64.56 10.52 98.93
NECEvent2014_3_3_scaffold_848 173_001_scaffold_848
Species: Bifidobacterium sp. MSTE12 (71.43%)
7 6287 bp 61.29 10.71 99.25
NECEvent2014_3_3_scaffold_3333 173_001_scaffold_3333
Species: Bifidobacterium sp. MSTE12 (100%)
2 1611 bp 62.57 6.05 99.26
NECEvent2014_3_3_scaffold_4701 173_001_scaffold_4701
Species: Bifidobacterium dentium (100%)
1 1093 bp 61.57 8.92 99.63
NECEvent2014_3_3_scaffold_4554 173_001_scaffold_4554
Species: Bifidobacterium sp. MSTE12 (100%)
1 1135 bp 71.81 4.49 99.65
NECEvent2014_3_3_scaffold_4939 173_001_scaffold_4939
Species: Bifidobacterium sp. MSTE12 (100%)
1 1026 bp 70.47 4.39 99.71
NECEvent2014_3_3_scaffold_3456 173_001_scaffold_3456
Species: Bifidobacterium sp. MSTE12 (100%)
1 1548 bp 61.82 5.23 99.81
NECEvent2014_3_3_scaffold_2356 173_001_scaffold_2356
Genus: Bifidobacterium (100%)
3 2276 bp 60.15 7.97 99.91
NECEvent2014_3_3_scaffold_2864 173_001_scaffold_2864
Species: Bifidobacterium dentium (100%)
1 1872 bp 60.20 6.25 100.00
NECEvent2014_3_3_scaffold_4130 173_001_scaffold_4130
Species: Bifidobacterium adolescentis (50%)
2 1273 bp 56.56 5.42 100.16
NECEvent2014_3_3_scaffold_1165 173_001_scaffold_1165
Species: Bifidobacterium sp. MSTE12 (100%)
2 4509 bp 53.71 9.61 100.27
NECEvent2014_3_3_scaffold_1355 173_001_scaffold_1355
Species: Bifidobacterium dentium (60%)
5 3936 bp 58.33 8.27 100.31
NECEvent2014_3_3_scaffold_2319 173_001_scaffold_2319
Species: Bifidobacterium dentium (100%)
2 2310 bp 64.33 7.27 100.52
NECEvent2014_3_3_scaffold_1762 173_001_scaffold_1762
Species: Bifidobacterium dentium (80%)
5 3028 bp 65.03 8.67 101.35
Displaying items 201-239 of 239 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.