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NECEvent2014_3_3_scaffold_423

Alias: 173_001_scaffold_423

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_3_scaffold_423_1
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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378..3362
DNA (2985bp) protein (995aa)
Microbial collagenase n=5 Tax=Bacillus cereus group RepID=C3A8S9_BACMY rbh
Collagenase family protein {ECO:0000313|EMBL:KIE46680.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 27
collagenase family protein
NECEvent2014_3_3_scaffold_423_2
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3967..5916
DNA (1950bp) protein (650aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:
metG; methionyl-tRNA ligase MetG (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Clostridium ultunense Esp RepID=M1Z695_9CLOT rbh
NECEvent2014_3_3_scaffold_423_3
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5929..6696
DNA (768bp) protein (256aa)
Metal-dependent DNase {ECO:0000313|EMBL:CCQ93250.1}; EC=3.1.21.- {ECO:0000313|EMBL:CCQ93250.1};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
Metal-dependent DNase n=1 Tax=Clostridium ultunense Esp RepID=M1YRT9_9CLOT rbh
deoxyribonuclease, TatD Mg-dependent
NECEvent2014_3_3_scaffold_423_4
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6843..7391
DNA (549bp) protein (183aa)
Ribonuclease M5 {ECO:0000256|HAMAP-Rule:MF_01469}; EC=3.1.26.8 {ECO:0000256|HAMAP-Rule:MF_01469};; RNase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; Ribosomal RNA terminal maturase M5 {ECO:0000256|HAMAP-Rul
Ribonuclease M5 n=1 Tax=Clostridium ultunense Esp RepID=M1Z5F7_9CLOT
primase-like protein
NECEvent2014_3_3_scaffold_423_5
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7381..8247
DNA (867bp) protein (289aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rR
rsmA; Ribosomal RNA small subunit methyltransferase A (EC:2.1.1.182)
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Clostridium ultunense Esp RepID=M1ZHC4_9CLOT rbh
NECEvent2014_3_3_scaffold_423_6
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8278..9750
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0ATM9_CLOA9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS77208.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604
NECEvent2014_3_3_scaffold_423_7
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9774..10142
DNA (369bp) protein (123aa)
HTH transcriptional regulator, ArsR family n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AVA9_CLOA9
HTH transcriptional regulator, ArsR family
HTH transcriptional regulator, ArsR family {ECO:0000313|EMBL:AFS77209.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain
NECEvent2014_3_3_scaffold_423_8
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10179..10445)
DNA (267bp) protein (89aa)
Putative Late competence development protein ComFB n=1 Tax=Clostridium ultunense Esp RepID=M1YRU4_9CLOT
Putative Late competence development protein ComFB {ECO:0000313|EMBL:CCQ93255.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostri
ComF operon protein; K02241 competence protein ComFB
NECEvent2014_3_3_scaffold_423_9
Peptoniphilus sp. BV3C26, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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10655..10885
DNA (231bp) protein (77aa)
glutaredoxin n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000287C322
YruB family protein {ECO:0000313|EMBL:ERT58825.1}; TaxID=1111134 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. BV3C26.;"
glutaredoxin
NECEvent2014_3_3_scaffold_423_10
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10940..11125)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AUE4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOD00277.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimati
hypothetical protein
NECEvent2014_3_3_scaffold_423_11
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11283..11648
DNA (366bp) protein (122aa)
Membrane protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MLH9_ALKOO
Membrane protein {ECO:0000313|EMBL:KGG80864.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.
membrane protein
Displaying 11 items

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