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NECEvent2014_3_3_scaffold_1166_3

Organism: NECEvent2014_3_3_Clostridium_ultunense-rel_31_8

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 14 / 38 MC: 3
Location: 1336..2109

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Clostridium ultunense Esp RepID=M1ZD73_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 88.7
  • Coverage: 257.0
  • Bit_score: 455
  • Evalue 2.80e-125
  • rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.7
  • Coverage: 257.0
  • Bit_score: 455
  • Evalue 4.00e-125
sporulation sigma factor SigG similarity KEGG
DB: KEGG
  • Identity: 83.7
  • Coverage: 257.0
  • Bit_score: 423
  • Evalue 5.80e-116

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Taxonomy

Clostridium ultunense → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 774
ATGCATATATCTAAAGTAGAGATATGTGGAGTAAATACTTCAAAACTTCCAGTACTAACTAATGAGCAAATGCAAAAATTATTTATTAAAATAAAAGCAGGAGATTTAAAAGCAAGGGAAGAATTTATTCAGGGAAATTTAAGACTAGTACTTAGCATTATCCAAAGATTTAATAGAAGAGGAGAACATGTTGATGATTTATTCCAGGTAGGCTGTATTGGTTTAATAAAAGCCATAGATAATTTTGATTTAAGCCAAAATGTACGATTCTCTACCTATGCTGTGCCTATGATTATAGGAGAGATAAGAAGATACTTAAGAGATAACAATTCAATTAGAGTTTCTAGATCACTTCGTGATATCGCATATAAGGCTTTGAATGCAAGAGAACAATTAATTAATAAAAATTCTAAAGAGCCGACTATATATGAGATAGCGGAAGAGTTAAATTTACCAAAAGAAGATGTAGTATTTGCTCTTGAGGCAATACAGGAACCAGTTTCTCTATTTGAACCAATATTTCATGATAGCGGTGATGCCATATTTGTTATGGATCAAGTAAAGGATGAGAAGGCCGAAGATGAAATATGGTTGAGGGAAATAGCACTTAGGGAAGCCATGGGTAAATTAAATAATAGGGAAAAACAAATATTGAATTTAAGGTTTTACGAAGGAAAAACTCAAATGGAGGTAGCTGAAGAAATTGGTATTTCGCAAGCACAAGTATCAAGGCTTGAGAAAAATGCTTTAAGACAAATGAGAAAATATGTCTAG
PROTEIN sequence
Length: 258
MHISKVEICGVNTSKLPVLTNEQMQKLFIKIKAGDLKAREEFIQGNLRLVLSIIQRFNRRGEHVDDLFQVGCIGLIKAIDNFDLSQNVRFSTYAVPMIIGEIRRYLRDNNSIRVSRSLRDIAYKALNAREQLINKNSKEPTIYEIAEELNLPKEDVVFALEAIQEPVSLFEPIFHDSGDAIFVMDQVKDEKAEDEIWLREIALREAMGKLNNREKQILNLRFYEGKTQMEVAEEIGISQAQVSRLEKNALRQMRKYV*