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NECEvent2014_3_3_scaffold_1166_7

Organism: NECEvent2014_3_3_Clostridium_ultunense-rel_31_8

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 14 / 38 MC: 3
Location: 3914..4507

Top 3 Functional Annotations

Value Algorithm Source
Arginine utilization regulatory protein RocR n=1 Tax=Clostridium ultunense Esp RepID=M1ZCI0_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 64.1
  • Coverage: 198.0
  • Bit_score: 242
  • Evalue 5.00e-61
Arginine utilization regulatory protein RocR {ECO:0000313|EMBL:CCQ95834.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium u similarity UNIPROT
DB: UniProtKB
  • Identity: 64.1
  • Coverage: 198.0
  • Bit_score: 242
  • Evalue 7.00e-61
sigma-54 dependent trancsriptional regulator similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 190.0
  • Bit_score: 199
  • Evalue 8.00e-49

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Taxonomy

Clostridium ultunense → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 594
ATGAAGAAAATAGACTTAAACAAAATCATAATGCAAAATATTTTGCATCATGCAGATATAGGGATTCACGTCATAGATAATGAGAGACGGACTGTAATCTATAATAAAGTTATGGCTCAGCTAGAAGGGCTAGATACAAATCAAGTAATTGAAAAGGATATTTTAGATATCTTTCCTAGTCTAAATGAAGAGACATCTACTTTAATAAAGGTACTTCATACAGGAGAAGCTATTTTAAATAGTACGCAATCCTATTTAAACTTTAAGGGACAAAGGATAACTACTATAAATTCAACTATACCTCTTTATTCGGATGAGAAGATAATAGGAGCTCTTGAAATAGCTAATAACATAACACATATTAAAAACTTATCTGATCAATTAATAGAATTACAAAATGAACTATCATCAACTAAATCATCAAAGAAAAGTCTTAGAGCTAAGATAAAAAGATATAATTTTGATGATATTATAGGCGAAGATCCGTCTATGTCATTAGCTAAGAAAATAGCAAGAAAGGCTAGTAATTCAAGTTCCAGTGTGCTTATATATGGAGATACAGGTACTGGTAAAGAACTGTTTGCCCAGAGTATC
PROTEIN sequence
Length: 198
MKKIDLNKIIMQNILHHADIGIHVIDNERRTVIYNKVMAQLEGLDTNQVIEKDILDIFPSLNEETSTLIKVLHTGEAILNSTQSYLNFKGQRITTINSTIPLYSDEKIIGALEIANNITHIKNLSDQLIELQNELSSTKSSKKSLRAKIKRYNFDDIIGEDPSMSLAKKIARKASNSSSSVLIYGDTGTGKELFAQSI