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NECEvent2014_3_3_scaffold_898_2

Organism: NECEvent2014_3_3_Clostridium_ultunense-rel_31_8

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 14 / 38 MC: 3
Location: comp(1506..2462)

Top 3 Functional Annotations

Value Algorithm Source
Collagen triple helix repeat n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MFN1_ALKOO similarity UNIREF
DB: UNIREF100
  • Identity: 76.9
  • Coverage: 286.0
  • Bit_score: 415
  • Evalue 6.90e-113
  • rbh
triple helix repeat-containing collagen similarity KEGG
DB: KEGG
  • Identity: 76.9
  • Coverage: 286.0
  • Bit_score: 415
  • Evalue 1.90e-113
Collagen triple helix repeat {ECO:0000313|EMBL:ABW17670.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (stra similarity UNIPROT
DB: UniProtKB
  • Identity: 76.9
  • Coverage: 286.0
  • Bit_score: 415
  • Evalue 9.70e-113

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Taxonomy

Alkaliphilus oremlandii → Alkaliphilus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 957
ATGTCATATATAGCTTATAATAATTGGTATGGATCAAAATGTGACCCTTGCAGAAGAGATCATGATTGCTGTAGAAGAGATCATGATTGTTGCAGAAGAGATCATGATTGTTGTAGAAAAGATCATGATAAATGCAAGCTTGAATGCGAATGTGTTCTAAGGTGTCCGACAGGTCCGACAGGTCCAACAGGTCCGACAGGCCCAACAGGTCCGACAGGTCCGACAGGTCCAACAGGTCCAGTAGGAACAGGAGTAACAGGTCCGACAGGCCCAACAGGTCCGACAGGTCCAACAGGTCCAACAGGAACAGGAGTAACAGGCCCAACAGGCCCAACAGGTCCAACAGGTCCGACAGGCCCAACAGGAACAGGAGTAACAGGTCCAACAGGTCCGACAGGCCCAACAGGTCCAACAGGTCCGACAGGTCCAACAGGTGTAGCGGGAGGCGGGGCTATTATCCCATTCGCTTCTGGTATAACACCTGCAGTGCTGACAACTGTATTAGGTGGAGTATTGAACACAGGTAGTATCGTGGGCTTTGGTTCCAACGTAACAGGTGTAACTGGTCTGGGTGGTGCAATTGATATTACACTAATAGGCGACCTAGCCTTCAATGTACCTCGCAGTGGAACATTAGATTCCTTATCTGCTACCTTTAACGTCACTCTAGGTTTGAGTTTAATTGGATCTACTGCTACGGTTTCTGCAACAGTATATTCTGCACCAGCTGGAAGCAACTCTTTTACACCAGTTCCAGGTGCAACAGTTACACTTTCTCCTAGCTTTAGTGGTGTTATCCCTGTAGGAGCAATTGCCACAGGTTCAATTAGTGGTATTGGCTTCCCTGTCACAGCAGGTATGCGTTTGATGCTTGTATTCTCTTCTGCAATTACAGCTGGAATTGATATAGCATCTACACTAACTGGTCAGGCAAGTGGTGGCATTGGAATTATCTAA
PROTEIN sequence
Length: 319
MSYIAYNNWYGSKCDPCRRDHDCCRRDHDCCRRDHDCCRKDHDKCKLECECVLRCPTGPTGPTGPTGPTGPTGPTGPTGPVGTGVTGPTGPTGPTGPTGPTGTGVTGPTGPTGPTGPTGPTGTGVTGPTGPTGPTGPTGPTGPTGVAGGGAIIPFASGITPAVLTTVLGGVLNTGSIVGFGSNVTGVTGLGGAIDITLIGDLAFNVPRSGTLDSLSATFNVTLGLSLIGSTATVSATVYSAPAGSNSFTPVPGATVTLSPSFSGVIPVGAIATGSISGIGFPVTAGMRLMLVFSSAITAGIDIASTLTGQASGGIGII*