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NECEvent2014_3_3_scaffold_786_5

Organism: NECEvent2014_3_3_Clostridium_ultunense-rel_31_8

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 14 / 38 MC: 3
Location: comp(3509..4624)

Top 3 Functional Annotations

Value Algorithm Source
rpoD3; RNA polymerase factor sigma-70 RpoD (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 81.3
  • Coverage: 369.0
  • Bit_score: 595
  • Evalue 1.20e-167
RNA polymerase sigma factor SigA n=1 Tax=Clostridium ultunense Esp RepID=M1Z3C1_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 82.4
  • Coverage: 370.0
  • Bit_score: 596
  • Evalue 1.50e-167
  • rbh
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense similarity UNIPROT
DB: UniProtKB
  • Identity: 82.4
  • Coverage: 370.0
  • Bit_score: 596
  • Evalue 2.10e-167

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Taxonomy

Clostridium ultunense → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1116
ATGGCGAGAATAGAAGCAGTTAAGAAATTGATCGCTAAGGGAAAAAAGGAAGGGATATTAACATATAGTGAATTAATAGATAGTTTAGAGGAGATATCTTTAGATGCAGACCAGATAGAAGAGGTTTATCAGAGTTTGGAAAGTATGGGAATTGAAGTAGTAGGAGATAAAGAAGATAGCTTGTTGCTAGAAAAAGATGACATTGATGACGATATGGATGATGATATTGATAAGGAAGATTTAGATGAAGTAGATATAAAAGAAGATTTATCAGTACCAAAAGGCATCAATGTAGATGACCCAGTTAGGATGTATCTGAAGGAAATTGGTAAAATACCTTTATTAACAGGAGATGAAGAGATTGAATTAGCTAAGAGGATGCAAGAAGGTGATGAAGAAGCAAAAAAACAACTTGCAGAGGCTAATCTTAGGCTAGTAGTTAGCATTGCAAAGAGATATGTAGGTAGAGGTATGCTTTTCCTAGATTTGATCCAAGAGGGCAATCTAGGACTTATGAAGGCAGTAGAAAAATTCGATTATAAAAAAGGATTTAAGTTTAGTACCTATGCAACATGGTGGATTCGTCAAGCAATTACAAGAGCTATAGCAGATCAAGCTAGAACTATTAGGATACCTGTTCATATGGTTGAAACAATCAATAAATTAGTTAGAGTACAAAGACAACTAGTGCAAGAACTAGGAAGAGATCCTAGTCCAGAAGAAATAGGTAAAGAAATGGGTATGGAAGTGGAAAAGGTTAGAGAAATAATGAAAATAGCACAGGAACCAGTTTCTTTAGAAACTCCTATTGGTGAAGAAGAAGATAGTCATTTAGGAGACTTCATACCTGATGATGAGGTACTAGCTCCTGCAGAAGCAGCTACATTTACAATGCTTAGGGAACAATTGATTGATGTATTAGATACTTTGACACCTCGGGAGCAAAAAGTATTGAGGCTTAGATTTGGTTTAGATGATGGTAGAGCTAGAACCCTTGAAGAAGTTGGTAAAGAGTTTGAAGTTACAAGAGAAAGAATTAGACAAATAGAAGCTAAGGCTTTAAGAAAGTTGCGTCATCCAAGTAGATCTAAAAAATTGAAGGATTTTCTAGAATAA
PROTEIN sequence
Length: 372
MARIEAVKKLIAKGKKEGILTYSELIDSLEEISLDADQIEEVYQSLESMGIEVVGDKEDSLLLEKDDIDDDMDDDIDKEDLDEVDIKEDLSVPKGINVDDPVRMYLKEIGKIPLLTGDEEIELAKRMQEGDEEAKKQLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLMKAVEKFDYKKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVRVQRQLVQELGRDPSPEEIGKEMGMEVEKVREIMKIAQEPVSLETPIGEEEDSHLGDFIPDDEVLAPAEAATFTMLREQLIDVLDTLTPREQKVLRLRFGLDDGRARTLEEVGKEFEVTRERIRQIEAKALRKLRHPSRSKKLKDFLE*