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NECEvent2014_3_3_scaffold_1797_1

Organism: NECEvent2014_3_3_Clostridium_ultunense-rel_31_8

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 14 / 38 MC: 3
Location: comp(2..487)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Clostridium ultunense Esp RepID=M1Z9Z5_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 45.3
  • Coverage: 161.0
  • Bit_score: 144
  • Evalue 6.70e-32
Uncharacterized protein {ECO:0000313|EMBL:KGG79412.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis similarity UNIPROT
DB: UniProtKB
  • Identity: 44.5
  • Coverage: 164.0
  • Bit_score: 145
  • Evalue 7.30e-32
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 49.3
  • Coverage: 146.0
  • Bit_score: 132
  • Evalue 9.80e-29

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Taxonomy

Caloranaerobacter azorensis → Caloranaerobacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 486
ATGTTGGATAAATTAATTGAAGAAGCTAGAAAAGGAAATAGGGCGGCAGCAGGAGAAATTATCAATAGATTGCAGCCATTGGTTATAAGCTCAATTAGAAAATATTATAATAATGGAAAAGAGTATGAGGATTTAATACAAGAAGGTAATTTAATGATTTTGGAAAGTTTAAAGAGCTATGACTCTACTAGGGCCGTACATTTCTTAGGATATATAAAATTGAATCTCAAATATCTATATCTAAATAAACATAAAAGAAAAATACATCTATCCCTAAACGACTCGATAGCAGATGGAGAACTGGAAATCATAGATATTCTAGTATCAGATGACAAAGCTGCACTGGATATAGTATTAGAAGATGAAAGAAATATCCAGCTTAACAAAGCTCTAGAAAAGCTTACTGAAAGGCAGAGAGAAATAGTAATTCTTTATTATGTAAAAAATATGAGTATTGGTTATATAGGAAGTAAGCTTGGTATAAGC
PROTEIN sequence
Length: 162
MLDKLIEEARKGNRAAAGEIINRLQPLVISSIRKYYNNGKEYEDLIQEGNLMILESLKSYDSTRAVHFLGYIKLNLKYLYLNKHKRKIHLSLNDSIADGELEIIDILVSDDKAALDIVLEDERNIQLNKALEKLTERQREIVILYYVKNMSIGYIGSKLGIS