ggKbase home page

NECEvent2014_3_4_scaffold_143

Alias: 173_002_scaffold_143

Search features with annotation key words

Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_4_scaffold_143_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

45..515
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AD39_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ86453.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_3_4_scaffold_143_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

680..1132
DNA (453bp) protein (151aa)
Transcription regulator, AsnC-type n=4 Tax=Clostridium butyricum RepID=B1QW68_CLOBU rbh
AsnC-type transcription regulator {ECO:0000313|EMBL:EEP53252.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4
AsnC family transcriptional regulator
NECEvent2014_3_4_scaffold_143_3
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1205..1333
DNA (129bp) protein (43aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QW67_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ96149.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
NECEvent2014_3_4_scaffold_143_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1477..1707
DNA (231bp) protein (77aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QW66_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP53956.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
hypothetical protein
NECEvent2014_3_4_scaffold_143_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1983..2849
DNA (867bp) protein (289aa)
trxB; thioredoxin reductase TrxB (EC:1.8.1.9)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z3R5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ34295.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_3_4_scaffold_143_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3056..5665
DNA (2610bp) protein (870aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AND9_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ34294.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
dynamin family
NECEvent2014_3_4_scaffold_143_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5655..6461
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AD35_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ34293.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_3_4_scaffold_143_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6490..8259
DNA (1770bp) protein (590aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AQE6_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ34292.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
flagellar motor component
NECEvent2014_3_4_scaffold_143_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8297..10084
DNA (1788bp) protein (596aa)
GTP-binding protein, HSR1-related n=3 Tax=Clostridium butyricum RepID=C4IL31_CLOBU rbh
Putative ATP /GTP binding protein {ECO:0000313|EMBL:KJZ86407.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C
GTPase
NECEvent2014_3_4_scaffold_143_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10312..10617
DNA (306bp) protein (102aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1QW62_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ34290.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_3_4_scaffold_143_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10802..11248
DNA (447bp) protein (149aa)
UPI0003D6303B related cluster n=1 Tax=unknown RepID=UPI0003D6303B rbh
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
cell division protein MraZ
NECEvent2014_3_4_scaffold_143_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11261..12193
DNA (933bp) protein (311aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_0100
rsmH; ribosomal RNA small subunit methyltransferase H (EC:2.1.1.199)
Ribosomal RNA small subunit methyltransferase H n=4 Tax=Clostridium butyricum RepID=B1QW60_CLOBU rbh
NECEvent2014_3_4_scaffold_143_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12233..12739
DNA (507bp) protein (169aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JB49_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ86475.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
protein required for the initiation of cell division
NECEvent2014_3_4_scaffold_143_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12805..15081
DNA (2277bp) protein (759aa)
Stage V sporulation protein D n=2 Tax=Clostridium butyricum RepID=M8KF31_CLOBU rbh
Stage V sporulation protein D {ECO:0000313|EMBL:ENZ34286.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;
stage V sporulation protein D
NECEvent2014_3_4_scaffold_143_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15271..17613
DNA (2343bp) protein (781aa)
Stage V sporulation protein D n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z3Q9_CLOBU rbh
Stage V sporulation protein D {ECO:0000313|EMBL:ENZ34285.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;
stage V sporulation protein D
NECEvent2014_3_4_scaffold_143_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17895..19355
DNA (1461bp) protein (487aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule
murE2; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AND1_CLOBU rbh
NECEvent2014_3_4_scaffold_143_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19408..20778
DNA (1371bp) protein (457aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostr
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AD29_CLOBU rbh
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase
NECEvent2014_3_4_scaffold_143_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20818..21795
DNA (978bp) protein (326aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase MraY (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=4 Tax=Clostridium butyricum RepID=B1QW54_CLOBU rbh
NECEvent2014_3_4_scaffold_143_19
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21820..22959
DNA (1140bp) protein (380aa)
Cell division protein FtsW n=4 Tax=Clostridium butyricum RepID=B1QW53_CLOBU rbh
Cell division protein FtsW {ECO:0000313|EMBL:KJZ86435.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
spoVE2; stage V sporulation protein E
NECEvent2014_3_4_scaffold_143_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23162..23980
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z3Q7_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ34280.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
divIB; cell division protein DivIB
NECEvent2014_3_4_scaffold_143_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23967..24692
DNA (726bp) protein (242aa)
Division initiation protein n=4 Tax=Clostridium butyricum RepID=B1QW51_CLOBU rbh
Division initiation protein {ECO:0000313|EMBL:EEP54510.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. B
hypothetical protein
NECEvent2014_3_4_scaffold_143_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24704..25096
DNA (393bp) protein (131aa)
Small basic protein n=4 Tax=Clostridium butyricum RepID=B1QW50_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ34278.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_3_4_scaffold_143_23
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25154..25843
DNA (690bp) protein (230aa)
Division initiation protein n=3 Tax=Clostridium butyricum RepID=M8JB58_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ86467.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_3_4_scaffold_143_24
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25935..26600
DNA (666bp) protein (222aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QW48_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ86454.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
pyridoxal phosphate enzyme, YggS family
NECEvent2014_3_4_scaffold_143_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26612..27070
DNA (459bp) protein (153aa)
Cell division protein SepF n=4 Tax=Clostridium butyricum RepID=B1QW47_CLOBU
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str
sepF; cell division protein SepF
NECEvent2014_3_4_scaffold_143_26
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27079..27336
DNA (258bp) protein (86aa)
Yggt family protein n=2 Tax=Clostridium butyricum RepID=M8JK95_CLOBU
Integral membrane protein YggT, involved in response to extracytoplasmic stress (Osmotic shock) {ECO:0000313|EMBL:KJZ86464.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; C
YGGT family
NECEvent2014_3_4_scaffold_143_27
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27341..28105
DNA (765bp) protein (255aa)
RNA-binding S4 domain protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JLK1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ86448.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
RNA-binding S4 domain-containing protein
NECEvent2014_3_4_scaffold_143_28
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28122..28733
DNA (612bp) protein (204aa)
DivIVA domain-containing protein n=2 Tax=Clostridium butyricum RepID=R0AQC9_CLOBU rbh
Cell division initiation protein DivIVA {ECO:0000313|EMBL:KJZ86457.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IB
DivIVA family protein
NECEvent2014_3_4_scaffold_143_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28740..28892
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KF44_CLOBU
Uncharacterized protein; TaxID=1306409 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DKU-01.;"
NECEvent2014_3_4_scaffold_143_30
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28929..29843
DNA (915bp) protein (305aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu
ylyB; RNA pseudouridine synthase YlyB (EC:5.4.99.-)
Pseudouridine synthase n=2 Tax=Clostridium butyricum RepID=M8K6V2_CLOBU rbh
Displaying items 1-30 of 68 in total

View Taxonomy