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NECEvent2014_3_4_scaffold_149

Alias: 173_002_scaffold_149

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_4_scaffold_149_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(244..417)
DNA (174bp) protein (58aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QXH7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31021.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_3_4_scaffold_149_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(508..1470)
DNA (963bp) protein (321aa)
Ribonuclease HI n=2 Tax=Clostridium butyricum RepID=B1QXH8_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:EEP55199.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
hypothetical protein
NECEvent2014_3_4_scaffold_149_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1510..2475)
DNA (966bp) protein (322aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QXH9_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:EEP55121.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
hypothetical protein
NECEvent2014_3_4_scaffold_149_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2683..3516)
DNA (834bp) protein (278aa)
Lipoprotein n=2 Tax=Clostridium butyricum RepID=B1QXI0_CLOBU rbh
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
YaeC family lipoprotein
NECEvent2014_3_4_scaffold_149_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3704..4342)
DNA (639bp) protein (213aa)
D-methionine transport system permease protein MetI n=3 Tax=Clostridium butyricum RepID=B1QXI1_CLOBU rbh
D-methionine transport system permease protein MetI {ECO:0000313|EMBL:EEP55663.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostri
metI; D-methionine transport system permease protein MetI
NECEvent2014_3_4_scaffold_149_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4342..5382)
DNA (1041bp) protein (347aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clos
metN; methionine import ATP-binding protein MetN (EC:3.6.3.-)
Methionine import ATP-binding protein MetN n=3 Tax=Clostridium butyricum RepID=C4IDY2_CLOBU rbh
NECEvent2014_3_4_scaffold_149_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5725..6195)
DNA (471bp) protein (157aa)
SsrA-binding protein n=3 Tax=Clostridium butyricum RepID=C4IDY3_CLOBU rbh
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clo
smpB; SsrA-binding protein SmpB
NECEvent2014_3_4_scaffold_149_8
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6379..8628)
DNA (2250bp) protein (750aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1523155 species="Bacteria; Firmicutes; Clostri
rnr; ribonuclease R (EC:3.1.13.1)
Ribonuclease R n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A3D8_CLOBU rbh
NECEvent2014_3_4_scaffold_149_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8940..10229)
DNA (1290bp) protein (430aa)
O-acetylhomoserine/O-acetylserine sulfhydrylase (EC:2.5.1.47)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AE01_CLOBU rbh
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase {ECO:0000313|EMBL:ENZ31029.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
NECEvent2014_3_4_scaffold_149_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10765..12789)
DNA (2025bp) protein (675aa)
Putative K(+)-stimulated pyrophosphate-energized sodium pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound sodium-translocating pyrophosphatase {ECO:
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1)
Putative K(+)-stimulated pyrophosphate-energized sodium pump n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YUA0_CLOBU rbh
NECEvent2014_3_4_scaffold_149_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13110..13343)
DNA (234bp) protein (78aa)
Preprotein translocase, SecG subunit n=4 Tax=Clostridium butyricum RepID=B1R152_CLOBU
Preprotein translocase subunit SecG {ECO:0000313|EMBL:KJZ87523.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN12
secG; preprotein translocase, SecG subunit SecG
NECEvent2014_3_4_scaffold_149_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13544..13897)
DNA (354bp) protein (118aa)
Inner membrane protein YhaI n=5 Tax=Clostridium butyricum RepID=B1R151_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87525.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
aminopeptidase
NECEvent2014_3_4_scaffold_149_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14277..15569)
DNA (1293bp) protein (431aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
eno; enolase Eno (EC:4.2.1.11)
Enolase n=4 Tax=Clostridium butyricum RepID=B1R150_CLOBU rbh
NECEvent2014_3_4_scaffold_149_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15794..16303
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AE07_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ31034.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
putative cell wall binding protein
NECEvent2014_3_4_scaffold_149_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16362..16964)
DNA (603bp) protein (201aa)
Uncharacterized protein n=5 Tax=Clostridium butyricum RepID=B1R149_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ87526.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_3_4_scaffold_149_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17090..18628)
DNA (1539bp) protein (513aa)
gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase GpmI (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=3 Tax=Clostridium butyricum RepID=B1R148_CLOBU rbh
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HA
NECEvent2014_3_4_scaffold_149_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18964..19710)
DNA (747bp) protein (249aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleB
Triosephosphate isomerase n=2 Tax=Clostridium butyricum RepID=M8JG73_CLOBU rbh
tpiA; triosephosphate isomerase
NECEvent2014_3_4_scaffold_149_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20102..21277)
DNA (1176bp) protein (392aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1523154 species="Bacteria;
Phosphoglycerate kinase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JHL5_CLOBU rbh
pgk; phosphoglycerate kinase
NECEvent2014_3_4_scaffold_149_19
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21409..22410)
DNA (1002bp) protein (334aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridi
Glyceraldehyde-3-phosphate dehydrogenase, type I n=4 Tax=Clostridium butyricum RepID=B1R145_CLOBU rbh
glyceraldehyde-3-phosphate dehydrogenase, type I
NECEvent2014_3_4_scaffold_149_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22484..23542)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YUB0_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ87509.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
DeoR family transcriptional regulator
NECEvent2014_3_4_scaffold_149_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23907..25289)
DNA (1383bp) protein (461aa)
RNA polymerase sigma-54 factor n=3 Tax=Clostridium butyricum RepID=B1R143_CLOBU rbh
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:EEP55541.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str
rpoN; putative RNA polymerase sigma-54 factor RpoN
NECEvent2014_3_4_scaffold_149_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25576..26412)
DNA (837bp) protein (279aa)
DegV protein n=4 Tax=Clostridium butyricum RepID=B1R142_CLOBU rbh
DegV family EDD domain-containing protein {ECO:0000313|EMBL:ENZ31042.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyr
DegV family protein
NECEvent2014_3_4_scaffold_149_23
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26432..26896)
DNA (465bp) protein (155aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAM
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=2 Tax=Clostridium butyricum RepID=B1R141_CLOBU rbh
spoU rRNA Methylase family protein
NECEvent2014_3_4_scaffold_149_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27081..28544)
DNA (1464bp) protein (488aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AE18_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ31044.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
VanW family protein
NECEvent2014_3_4_scaffold_149_25
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28868..29809)
DNA (942bp) protein (314aa)
Glycoside hydrolase, family 25 n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KB35_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ87521.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
glycoside hydrolase, family 25
NECEvent2014_3_4_scaffold_149_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29891..31381)
DNA (1491bp) protein (497aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sour
Sensory transduction protein kinase n=3 Tax=Clostridium butyricum RepID=B1R138_CLOBU rbh
integral membrane sensor signal transduction histidine kinase
NECEvent2014_3_4_scaffold_149_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31398..32105)
DNA (708bp) protein (236aa)
Regulatory protein VanR n=4 Tax=Clostridium butyricum RepID=B1R137_CLOBU rbh
Two-component system response regulator {ECO:0000313|EMBL:ENZ31047.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyric
two component transcriptional regulator
NECEvent2014_3_4_scaffold_149_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32260..33165)
DNA (906bp) protein (302aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000
ddl; D-alanine--D-alanine ligase Ddl (EC:6.3.2.4)
D-alanine--D-alanine ligase n=4 Tax=Clostridium butyricum RepID=B1R136_CLOBU rbh
NECEvent2014_3_4_scaffold_149_29
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33272..33892)
DNA (621bp) protein (207aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) l
nth; endonuclease III (EC:4.2.99.18)
Endonuclease III n=3 Tax=Clostridium butyricum RepID=B1R135_CLOBU rbh
NECEvent2014_3_4_scaffold_149_30
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33905..34609)
DNA (705bp) protein (235aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:KJZ86740.1}; EC=2.3.1.51 {ECO:0000313|EMBL:KJZ86740.1};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostr
plsD; glycerol-3-phosphate O-acyltransferase PlsD (EC:2.3.1.15)
Glycerol-3-phosphate O-acyltransferase n=2 Tax=Clostridium butyricum RepID=M8KB41_CLOBU rbh
Displaying items 1-30 of 55 in total

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