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NECEvent2014_3_4_scaffold_212

Alias: 173_002_scaffold_212

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_4_scaffold_212_1
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(165..1046)
DNA (882bp) protein (294aa)
33 kDa chaperonin n=3 Tax=Clostridium butyricum RepID=B1QXJ6_CLOBU rbh
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=1523155 species="Bacteria; Firmicutes; Clostr
hslO; 33 kDa chaperonin
NECEvent2014_3_4_scaffold_212_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1080..1826)
DNA (747bp) protein (249aa)
S-adenosylmethionine-dependent methyltransferase n=2 Tax=Clostridium butyricum RepID=B1QXJ7_CLOBU rbh
Methyltransferase type 11 {ECO:0000313|EMBL:EEP54560.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoN
type 11 methyltransferase
NECEvent2014_3_4_scaffold_212_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1935..2198)
DNA (264bp) protein (88aa)
Small, acid-soluble spore protein, alpha/beta family n=4 Tax=Clostridium butyricum RepID=B1QXJ8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ88065.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
small, acid-soluble spore protein, alpha/beta type
NECEvent2014_3_4_scaffold_212_4
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2872..3789
DNA (918bp) protein (306aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418};; TaxID=1523156 specie
dapA2; 4-hydroxy-tetrahydrodipicolinate synthase DapA (EC:4.3.3.7)
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AIJ2_CLOBU rbh
NECEvent2014_3_4_scaffold_212_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3801..4559
DNA (759bp) protein (253aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rul
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KDC9_CLOBU rbh
dapB; 4-hydroxy-tetrahydrodipicolinate reductase DapB
NECEvent2014_3_4_scaffold_212_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4680..5441)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z8H6_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36151.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ABC transporter-like protein
NECEvent2014_3_4_scaffold_212_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5492..6463)
DNA (972bp) protein (324aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z8T2_CLOBU rbh
Oligopeptide transport system permease protein OppB {ECO:0000313|EMBL:KJZ88057.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostr
oligopeptide/dipeptide ABC transporter ATPase
NECEvent2014_3_4_scaffold_212_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6485..8017)
DNA (1533bp) protein (511aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ATU2_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36149.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
peptide ABC transporter periplasmic protein
NECEvent2014_3_4_scaffold_212_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8023..8853)
DNA (831bp) protein (277aa)
Inner membrane ABC transporter permease protein YddQ n=3 Tax=Clostridium butyricum RepID=B1QXK3_CLOBU rbh
Dipeptide transport system permease protein DppC {ECO:0000313|EMBL:KJZ88069.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi
binding-protein-dependent transport system inner membrane protein
NECEvent2014_3_4_scaffold_212_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8855..9715)
DNA (861bp) protein (287aa)
Inner membrane ABC transporter permease protein YddR n=3 Tax=Clostridium butyricum RepID=B1QXK4_CLOBU rbh
Inner membrane ABC transporter permease protein YddR {ECO:0000313|EMBL:EEP53541.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostr
binding-protein-dependent transport system inner membrane protein
NECEvent2014_3_4_scaffold_212_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10037..10996)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z8G7_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36146.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
succinylglutamate desuccinylase/aspartoacylase
NECEvent2014_3_4_scaffold_212_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11302..12579)
DNA (1278bp) protein (426aa)
rpfG2; cyclic di-GMP phosphodiesterase response regulator RpfG (EC:3.1.4.52)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z8S5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36145.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_3_4_scaffold_212_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12757..14412)
DNA (1656bp) protein (552aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ATT7_CLOBU rbh
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA {ECO:0000313|EMBL:KJZ88052.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clost
oppA; oligopeptide-binding protein OppA
NECEvent2014_3_4_scaffold_212_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14530..15513)
DNA (984bp) protein (328aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AII1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ88059.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
appF4; oligopeptide transport ATP-binding protein AppF
NECEvent2014_3_4_scaffold_212_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15513..16520)
DNA (1008bp) protein (336aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AVU0_CLOBU rbh
Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain {ECO:0000313|EMBL:ENZ36142.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
oligopeptide transport ATP-binding protein OppD
NECEvent2014_3_4_scaffold_212_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16533..17477)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z8G0_CLOBU rbh
Oligopeptide transport system permease protein OppC {ECO:0000313|EMBL:KJZ88067.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostr
oligopeptide transport system permease OppC
NECEvent2014_3_4_scaffold_212_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17490..18416)
DNA (927bp) protein (309aa)
Oligopeptide transport system permease protein OppB n=3 Tax=Clostridium butyricum RepID=B1QXL1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36140.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
oligopeptide transport system permease OppB
NECEvent2014_3_4_scaffold_212_18
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18950..20092)
DNA (1143bp) protein (381aa)
N-acetyl-L,L-diaminopimelate aminotransferase {ECO:0000313|EMBL:KJZ89556.1}; EC=2.6.1.- {ECO:0000313|EMBL:KJZ89556.1};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostrid
yugH1; putative aminotransferase YugH (EC:2.6.1.-)
Aminotransferase, classes I and II n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JIU2_CLOBU rbh
NECEvent2014_3_4_scaffold_212_19
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20372..21082
DNA (711bp) protein (237aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase {ECO:0000256|HAMAP-Rule:MF_01691, ECO:0000256|SAAS:SAAS00023633}; EC=2.3.1.89 {ECO:0000256|HAMAP-Rule:MF_01691, ECO:0000256|SAAS:SAAS00
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase n=3 Tax=Clostridium butyricum RepID=C4IJ10_CLOBU rbh
tetrahydrodipicolinate succinyltransferase domain-containing protein
NECEvent2014_3_4_scaffold_212_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21203..24178)
DNA (2976bp) protein (992aa)
UPI0003D5CAC1 related cluster n=1 Tax=unknown RepID=UPI0003D5CAC1 rbh
Pullulanase, type I {ECO:0000313|EMBL:ETI90024.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
amyX; alpha-dextran endo-1,6-alpha-glucosidase
NECEvent2014_3_4_scaffold_212_21
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24480..25142)
DNA (663bp) protein (221aa)
Single-stranded DNA binding protein n=3 Tax=Clostridium butyricum RepID=C4IJ12_CLOBU rbh
Surface antigen {ECO:0000313|EMBL:KJZ97176.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
single-strand binding protein/primosomal replication protein
NECEvent2014_3_4_scaffold_212_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25248..26012)
DNA (765bp) protein (255aa)
Polysaccharide deacetylase family protein n=4 Tax=Clostridium butyricum RepID=B1QSU0_CLOBU rbh
Polysaccharide deacetylase family sporulation protein PdaB {ECO:0000313|EMBL:ENZ36135.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
polysaccharide deacetylase
NECEvent2014_3_4_scaffold_212_23
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26135..26659
DNA (525bp) protein (175aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QST9_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ85213.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_3_4_scaffold_212_24
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26714..27655)
DNA (942bp) protein (314aa)
40-residue YVTN family beta-propeller n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AIH0_CLOBU rbh
Surface antigen {ECO:0000313|EMBL:KJZ85201.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
YVTN beta-propeller repeat-containing protein
NECEvent2014_3_4_scaffold_212_25
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27902..28150
DNA (249bp) protein (83aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QST7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85215.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_3_4_scaffold_212_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28210..30165)
DNA (1956bp) protein (652aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z8E2_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36131.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
HIRAN domain protein
NECEvent2014_3_4_scaffold_212_27
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30216..31523)
DNA (1308bp) protein (436aa)
Dihydrofolate synthase/Folylpolyglutamate synthase {ECO:0000313|EMBL:KJZ92093.1}; EC=6.3.2.12 {ECO:0000313|EMBL:KJZ92093.1};; EC=6.3.2.17 {ECO:0000313|EMBL:KJZ92093.1};; TaxID=1523155 species="Bacteri
folC; folylpolyglutamate synthase FolC (EC:6.3.2.17)
FolC protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z8Q5_CLOBU rbh
NECEvent2014_3_4_scaffold_212_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31838..32698)
DNA (861bp) protein (287aa)
Drug efflux protein n=2 Tax=Clostridium butyricum RepID=B1QST4_CLOBU rbh
Integral membrane protein TerC {ECO:0000313|EMBL:EEP53670.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str
alx2; inner membrane protein Alx
NECEvent2014_3_4_scaffold_212_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(32840..35482)
DNA (2643bp) protein (881aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|H
Valine--tRNA ligase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AIG4_CLOBU rbh
valS; valyl-tRNA synthetase
NECEvent2014_3_4_scaffold_212_30
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36070..36357
DNA (288bp) protein (96aa)
UPI0003D65165 related cluster n=1 Tax=unknown RepID=UPI0003D65165
YlxP-like protein {ECO:0000313|EMBL:KJZ85214.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
Displaying items 1-30 of 37 in total

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