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NECEvent2014_3_4_scaffold_340

Alias: 173_002_scaffold_340

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_4_scaffold_340_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(497..1498)
DNA (1002bp) protein (334aa)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00834}; EC=2.6.1.62 {ECO:0000256|HAMAP-Rule:MF_00834};; 7,8-diamino-pelargonic acid aminotransferase {ECO:0000256|
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JBX8_CLOBU rbh
adenosylmethionine-8-amino-7-oxononanoate aminotransferase
NECEvent2014_3_4_scaffold_340_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1501..2187)
DNA (687bp) protein (229aa)
ATP-dependent dethiobiotin synthetase BioD {ECO:0000256|HAMAP-Rule:MF_00336}; EC=6.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00336};; DTB synthetase {ECO:0000256|HAMAP-Rule:MF_00336}; Dethiobiotin synthase {EC
bioD; dithiobiotin synthetase (EC:6.3.3.3)
UPI0003D67E29 related cluster n=1 Tax=unknown RepID=UPI0003D67E29 rbh
NECEvent2014_3_4_scaffold_340_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2203..2793)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YPY4_CLOBU rbh
Substrate-specific component BioY of biotin ECF transporter {ECO:0000313|EMBL:KJZ88930.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
BioY protein
NECEvent2014_3_4_scaffold_340_4
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2993..3145
DNA (153bp) protein (51aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QY59_CLOBU
Glutamine transport system permease protein glnP {ECO:0000313|EMBL:KJZ86222.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi
hypothetical protein
NECEvent2014_3_4_scaffold_340_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3431..4144
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ABJ1_CLOBU rbh
Arginine/ornithine antiporter ArcD {ECO:0000313|EMBL:KJZ88899.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125
Sulfite exporter TauE/SafE.
NECEvent2014_3_4_scaffold_340_6
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4459..5796
DNA (1338bp) protein (446aa)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase {ECO:0000313|EMBL:KJZ95136.1}; EC=2.6.1.62 {ECO:0000313|EMBL:KJZ95136.1};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridi
Adenosylmethionine--8-amino-7-oxononanoate transaminase n=2 Tax=Clostridium butyricum RepID=M8JBY2_CLOBU rbh
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
NECEvent2014_3_4_scaffold_340_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5817..6938
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A9U3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ29524.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
methanol dehydrogenase
NECEvent2014_3_4_scaffold_340_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7120..7827
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YPY8_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ29525.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
GntR family transcriptional regulator
NECEvent2014_3_4_scaffold_340_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7837..8835
DNA (999bp) protein (333aa)
ansA; L-asparaginase 1 (EC:3.5.1.1)
L-asparaginase n=3 Tax=Clostridium butyricum RepID=B1QY64_CLOBU rbh
L-asparaginase, type I {ECO:0000313|EMBL:ENZ29526.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_3_4_scaffold_340_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8917..9714
DNA (798bp) protein (266aa)
Glutamine ABC transporter, permease/substrate-binding protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JYL5_CLOBU rbh
Glutamine ABC transporter, periplasmic glutamine-binding protein / Glutamine transport system permease protein GlnP {ECO:0000313|EMBL:KJZ88891.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostrid
extracellular solute-binding protein
NECEvent2014_3_4_scaffold_340_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9783..10448
DNA (666bp) protein (222aa)
Glutamine ABC transporter, permease/substrate-binding protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JBY6_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ88924.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
glnP1; glutamine transport system permease protein GlnP
NECEvent2014_3_4_scaffold_340_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10429..11160
DNA (732bp) protein (244aa)
Glutamine transport ATP-binding protein GlnQ n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JD82_CLOBU rbh
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KHD14901.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyr
glnQ1; glutamine transport ATP-binding protein GlnQ
NECEvent2014_3_4_scaffold_340_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11452..12249
DNA (798bp) protein (266aa)
Glutamine ABC transporter, permease/substrate-binding protein n=2 Tax=Clostridium butyricum RepID=M8J2Y1_CLOBU rbh
Glutamine transport system permease protein glnP {ECO:0000313|EMBL:KJZ88898.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi
glnH1; glutamine-binding periplasmic protein GlnH
NECEvent2014_3_4_scaffold_340_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13078..13965)
DNA (888bp) protein (296aa)
ureidoglycolate lyase (EC:4.3.2.3) rbh
5-carboxymethyl-2-hydroxymuconate Delta-isomerase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K6N0_CLOBU rbh
Fumarylacetoacetase {ECO:0000313|EMBL:KHD14899.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
NECEvent2014_3_4_scaffold_340_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14072..14563)
DNA (492bp) protein (164aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu
folA; dihydrofolate reductase FolA (EC:1.5.1.3)
Dihydrofolate reductase n=2 Tax=Clostridium butyricum RepID=M8JYM0_CLOBU rbh
NECEvent2014_3_4_scaffold_340_16
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14673..15464)
DNA (792bp) protein (264aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:000
thyA; thymidylate synthase ThyA (EC:2.1.1.45)
Thymidylate synthase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JBZ0_CLOBU rbh
NECEvent2014_3_4_scaffold_340_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15576..15980)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A9V2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ88935.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Glyoxalase/bleomycin resistance protein/dioxygenase
NECEvent2014_3_4_scaffold_340_18
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16266..17933
DNA (1668bp) protein (556aa)
Alcohol dehydrogenase {ECO:0000313|EMBL:KJZ86198.1}; EC=1.2.1.10 {ECO:0000313|EMBL:KJZ86198.1};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
dnaX; DNA polymerase III subunit gamma/tau (EC:2.7.7.7)
DNA polymerase III subunit gamma/tau n=2 Tax=Clostridium butyricum RepID=M8J2Y9_CLOBU rbh
NECEvent2014_3_4_scaffold_340_19
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18058..18396
DNA (339bp) protein (113aa)
Nucleoid-associated protein CBDKU1_40060 n=2 Tax=Clostridium butyricum RepID=M8K6N7_CLOBU
Nucleoid-associated protein ClosIBUN13A_CONTIG65g00717 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
DNA-binding protein, YbaB/EbfC family
NECEvent2014_3_4_scaffold_340_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18576..19172
DNA (597bp) protein (199aa)
Recombination protein RecR n=4 Tax=Clostridium butyricum RepID=B1QY73_CLOBU rbh
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
recR; recombination protein RecR
NECEvent2014_3_4_scaffold_340_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19397..19675
DNA (279bp) protein (93aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QY74_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP52376.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
hypothetical protein
NECEvent2014_3_4_scaffold_340_22
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19699..19968
DNA (270bp) protein (90aa)
Sigma-K factor processing regulatory protein BofA n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JD93_CLOBU
Inhibitor of pro-sigmaK processing BofA {ECO:0000313|EMBL:KJZ88916.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IB
bofA; sigma-K factor processing regulatory protein BofA
NECEvent2014_3_4_scaffold_340_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20267..21661
DNA (1395bp) protein (465aa)
SH3, type 3 domain protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J2Z5_CLOBU rbh
Ligand-binding protein SH3 {ECO:0000313|EMBL:KHD14890.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
SH3 type 3 domain-containing protein
NECEvent2014_3_4_scaffold_340_24
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21736..21924
DNA (189bp) protein (63aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QY77_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ91890.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
hypothetical protein
NECEvent2014_3_4_scaffold_340_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22134..23216
DNA (1083bp) protein (361aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=9978
Phosphoserine aminotransferase n=2 Tax=Clostridium butyricum RepID=M8JYN1_CLOBU rbh
MFS transporter
Displaying 25 items

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