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NECEvent2014_3_4_scaffold_345

Alias: 173_002_scaffold_345

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_4_scaffold_345_1
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(275..1714)
DNA (1440bp) protein (480aa)
arginine decarboxylase (EC:4.1.1.19)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ALN2_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ92389.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
NECEvent2014_3_4_scaffold_345_2
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1708..2928)
DNA (1221bp) protein (407aa)
Peptidase M16 domain protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J7V7_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ92390.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
putative Zn-dependent peptidase
NECEvent2014_3_4_scaffold_345_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3107..4792)
DNA (1686bp) protein (562aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z182_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ33666.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
methyl-accepting chemotaxis protein
NECEvent2014_3_4_scaffold_345_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4957..6318)
DNA (1362bp) protein (454aa)
SCIFF radical SAM maturase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ANJ5_CLOBU rbh
SCIFF radical SAM maturase {ECO:0000313|EMBL:ENZ33667.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
radical SAM domain protein
NECEvent2014_3_4_scaffold_345_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6844..8778)
DNA (1935bp) protein (645aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ABA9_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ33668.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
htpG; chaperone protein HtpG
NECEvent2014_3_4_scaffold_345_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8857..9339)
DNA (483bp) protein (161aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=2 Tax=Clostridium butyricum 60E.3 RepID=R0ALN7_CLOBU
Sensory box/ggdef domain/hd protein {ECO:0000313|EMBL:ETI91076.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum
diguanylate cyclase and metal dependent phosphohydrolase
NECEvent2014_3_4_scaffold_345_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9293..10609)
DNA (1317bp) protein (439aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=2 Tax=Clostridium butyricum 60E.3 RepID=R0ALN7_CLOBU rbh
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:ENZ33669.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clost
diguanylate cyclase and metal dependent phosphohydrolase
NECEvent2014_3_4_scaffold_345_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10794..12851)
DNA (2058bp) protein (686aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z1W7_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ33670.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component
NECEvent2014_3_4_scaffold_345_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12853..13620)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z188_CLOBU rbh
Bacitracin export ATP-binding protein BceA {ECO:0000313|EMBL:ETI91074.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium but
ABC transporter related protein
NECEvent2014_3_4_scaffold_345_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13809..14864)
DNA (1056bp) protein (352aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ANJ9_CLOBU rbh
integral membrane sensor signal transduction histidine kinase
NECEvent2014_3_4_scaffold_345_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14861..15550)
DNA (690bp) protein (230aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum 60E.3 RepID=R0ABB7_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ89017.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
two component transcriptional regulator
NECEvent2014_3_4_scaffold_345_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15739..16413)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ALP4_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ33674.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_3_4_scaffold_345_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16609..17133
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z1X3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ33675.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_3_4_scaffold_345_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17182..19416)
DNA (2235bp) protein (745aa)
YhgE/Pip domain-containing protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z196_CLOBU rbh
YhgE/Pip domain-containing protein {ECO:0000313|EMBL:ENZ33676.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60
phage infection protein
NECEvent2014_3_4_scaffold_345_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19655..20797)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ANK6_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ33677.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
xylanase/chitin deacetylase
NECEvent2014_3_4_scaffold_345_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21042..22058)
DNA (1017bp) protein (339aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {EC
trpS; tryptophan--tRNA ligase TrpS (EC:6.1.1.2)
Tryptophan--tRNA ligase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JID3_CLOBU rbh
Displaying 16 items

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