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NECEvent2014_3_4_scaffold_354

Alias: 173_002_scaffold_354

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_4_scaffold_354_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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157..2598
DNA (2442bp) protein (814aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ACA8_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83358.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Y_Y_Y domain containing protein
NECEvent2014_3_4_scaffold_354_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2653..3480
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YSJ9_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ30415.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
lytic transglycosylase, catalytic
NECEvent2014_3_4_scaffold_354_3
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3695..4411
DNA (717bp) protein (239aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu
ytzG1; RNA pseudouridine synthase YtzG (EC:5.4.99.-)
Pseudouridine synthase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YS25_CLOBU rbh
NECEvent2014_3_4_scaffold_354_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5005..8358
DNA (3354bp) protein (1118aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
pcrA; ATP-dependent DNA helicase PcrA (EC:3.6.4.12)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AE49_CLOBU rbh
NECEvent2014_3_4_scaffold_354_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8534..10525
DNA (1992bp) protein (664aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1523154 species="Bacteri
ligA; DNA ligase LigA (EC:6.5.1.2)
DNA ligase n=2 Tax=Clostridium butyricum RepID=M8KAD8_CLOBU rbh
NECEvent2014_3_4_scaffold_354_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10530..10802
DNA (273bp) protein (91aa)
UPI0003D60D70 related cluster n=1 Tax=unknown RepID=UPI0003D60D70
Uncharacterized protein {ECO:0000313|EMBL:ETI91568.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
NECEvent2014_3_4_scaffold_354_7
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11113..11403
DNA (291bp) protein (97aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
gatC1; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=2 Tax=Clostridium butyricum RepID=B1R0A2_CLOBU
NECEvent2014_3_4_scaffold_354_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11425..12882
DNA (1458bp) protein (486aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=140394
gatA; glutamyl-tRNA(Gln) amidotransferase subunit A (EC:6.3.5.-)
UPI00039D444D related cluster n=1 Tax=unknown RepID=UPI00039D444D rbh
NECEvent2014_3_4_scaffold_354_9
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12902..14332
DNA (1431bp) protein (477aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00247567}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.-
gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=2 Tax=Clostridium butyricum RepID=M8K256_CLOBU rbh
NECEvent2014_3_4_scaffold_354_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14387..14689)
DNA (303bp) protein (101aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R0A5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83350.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_3_4_scaffold_354_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14893..16380
DNA (1488bp) protein (496aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YSL0_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ30425.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
peptide ABC transporter periplasmic protein
NECEvent2014_3_4_scaffold_354_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16436..18151)
DNA (1716bp) protein (572aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YS37_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ30426.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_3_4_scaffold_354_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18273..19250
DNA (978bp) protein (326aa)
Hydrogenase maturation factor n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K242_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83359.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
AIR synthase-like protein
NECEvent2014_3_4_scaffold_354_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


19322..19936
DNA (615bp) protein (205aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard p
Non-canonical purine NTP pyrophosphatase (EC:3.6.1.19)
Non-canonical purine NTP pyrophosphatase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KAB6_CLOBU rbh
NECEvent2014_3_4_scaffold_354_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19959..20444
DNA (486bp) protein (162aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sour
ysnB; putative metallophosphoesterase YsnB (EC:3.1.4.-)
Ser/Thr protein phosphatase family protein n=3 Tax=Clostridium butyricum RepID=B1R0B0_CLOBU rbh
NECEvent2014_3_4_scaffold_354_trna_1
unknown

Not on your lists

20917..20989
DNA (73bp)
transferRNA
NECEvent2014_3_4_scaffold_354_trna_2
unknown

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21020..21090
DNA (71bp)
transferRNA
NECEvent2014_3_4_scaffold_354_trna_3
unknown

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21209..21282
DNA (74bp)
transferRNA
NECEvent2014_3_4_scaffold_354_trna_4
unknown

Not on your lists

21293..21365
DNA (73bp)
transferRNA
NECEvent2014_3_4_scaffold_354_trna_5
unknown

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21394..21464
DNA (71bp)
transferRNA
NECEvent2014_3_4_scaffold_354_trna_6
unknown

Not on your lists

21495..21568
DNA (74bp)
transferRNA
Displaying 21 items

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