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NECEvent2014_3_4_scaffold_358

Alias: 173_002_scaffold_358

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_4_scaffold_358_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(195..629)
DNA (435bp) protein (145aa)
UspA domain protein n=4 Tax=Clostridium butyricum RepID=C4IJU0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33680.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
UspA domain-containing protein
NECEvent2014_3_4_scaffold_358_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(940..1269)
DNA (330bp) protein (110aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8K3L6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33681.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_3_4_scaffold_358_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1458..2792)
DNA (1335bp) protein (445aa)
Pyridine nucleotide-disulfide oxidoreductase NADH dehydrogenase {ECO:0000313|EMBL:KJZ88989.1}; EC=1.6.99.3 {ECO:0000313|EMBL:KJZ88989.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clos
coenzyme A disulfide reductase (EC:1.6.99.3)
NADH oxidase (Noxase) n=2 Tax=Clostridium butyricum RepID=M8JGU7_CLOBU rbh
NECEvent2014_3_4_scaffold_358_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3083..3922)
DNA (840bp) protein (280aa)
Quinolinate phosphoribosyltransferase decarboxylating {ECO:0000313|EMBL:KJZ89063.1}; EC=2.4.2.19 {ECO:0000313|EMBL:KJZ89063.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales;
Nicotinate-nucleotide diphosphorylase (Carboxylating) n=2 Tax=Clostridium butyricum RepID=M8JID7_CLOBU rbh
nicotinate-nucleotide pyrophosphorylase
NECEvent2014_3_4_scaffold_358_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3900..5207)
DNA (1308bp) protein (436aa)
nadB; L-aspartate oxidase NadB (EC:1.4.3.16)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=R0ALR2_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ33684.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_3_4_scaffold_358_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5200..6123)
DNA (924bp) protein (308aa)
Quinolinate synthase {ECO:0000256|SAAS:SAAS00096027}; EC=2.5.1.72 {ECO:0000256|SAAS:SAAS00096027};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.
nadA; quinolinate synthase A (EC:2.5.1.72)
Quinolinate synthetase complex, A subunit n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z1Z4_CLOBU rbh
NECEvent2014_3_4_scaffold_358_7
unknown

Not on your lists

6143..6442
DNA (300bp) protein (100aa)

This feature has no annotations

NECEvent2014_3_4_scaffold_358_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6483..6851
DNA (369bp) protein (123aa)
UPI0003D5C57D related cluster n=1 Tax=unknown RepID=UPI0003D5C57D
GntR-family transcriptional regulator {ECO:0000313|EMBL:ETI91059.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricu
yhcF; HTH-type transcriptional regulator YhcF
NECEvent2014_3_4_scaffold_358_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6851..7558
DNA (708bp) protein (236aa)
UPI0003D5ACFA related cluster n=1 Tax=unknown RepID=UPI0003D5ACFA rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ETI91058.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum
ABC transporter
NECEvent2014_3_4_scaffold_358_10
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7552..8361
DNA (810bp) protein (270aa)
Putative ABC transporter, permease protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JIE1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ86519.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
ABC transporter permease
NECEvent2014_3_4_scaffold_358_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8458..10383)
DNA (1926bp) protein (642aa)
Hydroxylamine reductase {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00038686}; EC=1.7.99.1 {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00150119};; Hybrid-cluster protein {ECO:000
Hydroxylamine reductase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ALS0_CLOBU rbh
hybrid cluster protein
NECEvent2014_3_4_scaffold_358_12
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10610..11245)
DNA (636bp) protein (212aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8KBV8_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ92379.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_3_4_scaffold_358_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11475..12530
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K3M4_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KHD15902.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
NECEvent2014_3_4_scaffold_358_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12561..13532
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ANP5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ33692.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Methyl-accepting chemotaxis protein
NECEvent2014_3_4_scaffold_358_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13586..14887)
DNA (1302bp) protein (434aa)
Pyrimidine-nucleoside phosphorylase {ECO:0000313|EMBL:KJZ88962.1}; EC=2.4.2.2 {ECO:0000313|EMBL:KJZ88962.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Cl
pyrimidine-nucleoside phosphorylase (EC:2.4.2.2)
Pyrimidine-nucleoside phosphorylase n=2 Tax=Clostridium butyricum RepID=M8JIE4_CLOBU rbh
NECEvent2014_3_4_scaffold_358_16
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15065..15727)
DNA (663bp) protein (221aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114};; 2-deoxy-D-ribose 5-phosphate aldolase {E
deoC; deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=4 Tax=Clostridium butyricum RepID=B1QZT0_CLOBU rbh
NECEvent2014_3_4_scaffold_358_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16022..16816
DNA (795bp) protein (265aa)
Transcriptional regulator, DeoR family n=2 Tax=Clostridium butyricum RepID=C4IJS5_CLOBU rbh
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:EEP54217.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricu
deoR; deoxyribose operon repressor
NECEvent2014_3_4_scaffold_358_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16866..17840)
DNA (975bp) protein (325aa)
Putative uncharacterized protein n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IJS4_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:EEP53686.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
hypothetical protein
NECEvent2014_3_4_scaffold_358_19
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17971..18726)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ANQ0_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ88982.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
cyclic nucleotide-binding domain protein
NECEvent2014_3_4_scaffold_358_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18782..20128)
DNA (1347bp) protein (449aa)
Branched-chain amino acid transport system II carrier protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ABF3_CLOBU rbh
Branched-chain amino acid transport system carrier protein {ECO:0000313|EMBL:KJZ88963.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
brnQ; branched-chain amino acid transport system II carrier protein
NECEvent2014_3_4_scaffold_358_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20817..21251)
DNA (435bp) protein (145aa)
Transcriptional regulator, MarR family n=2 Tax=Clostridium butyricum RepID=B1QZT4_CLOBU
Organic hydroperoxide resistance transcriptional regulator {ECO:0000313|EMBL:KJZ88996.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
ohrR; organic hydroperoxide resistance transcriptional regulator
Displaying 21 items

View Taxonomy