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NECEvent2014_3_4_scaffold_398

Alias: 173_002_scaffold_398

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_4_scaffold_398_1
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..343
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AAZ6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ91933.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_3_4_scaffold_398_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(506..1285)
DNA (780bp) protein (260aa)
Zinc/iron permease n=2 Tax=Clostridium butyricum RepID=M8JLN1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ88954.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
zupT; zinc transporter ZupT
NECEvent2014_3_4_scaffold_398_trna_1
unknown

Not on your lists

1723..1794
DNA (72bp)
transferRNA
NECEvent2014_3_4_scaffold_398_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2090..2611)
DNA (522bp) protein (174aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
Signal peptidase I n=4 Tax=Clostridium butyricum RepID=B1QZH3_CLOBU rbh
signal peptidase I
NECEvent2014_3_4_scaffold_398_4
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2630..3076)
DNA (447bp) protein (149aa)
Putative membrane protein n=2 Tax=Clostridium butyricum RepID=B1QZH4_CLOBU rbh
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase {ECO:0000313|EMBL:KJZ90178.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiale
membrane protein
NECEvent2014_3_4_scaffold_398_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3073..3276)
DNA (204bp) protein (68aa)
HTH DNA-binding protein n=2 Tax=Clostridium butyricum RepID=B1QZH5_CLOBU
Conserved domain protein {ECO:0000313|EMBL:EEP54507.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
Predicted transcriptional regulators
NECEvent2014_3_4_scaffold_398_6
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3603..4130
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JMX2_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ90168.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
hypothetical protein
NECEvent2014_3_4_scaffold_398_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4306..4446
DNA (141bp) protein (47aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JLM6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33589.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_3_4_scaffold_398_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4551..4946)
DNA (396bp) protein (132aa)
Conserved protein n=4 Tax=Clostridium butyricum RepID=B1QZH8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33590.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_3_4_scaffold_398_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5364..6164
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z0Z2_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ33591.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
cell wall binding repeat-containing protein
NECEvent2014_3_4_scaffold_398_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6227..7024)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ANB1_CLOBU rbh
Putative taurine transport ATP-binding protein tauB {ECO:0000313|EMBL:KJZ89038.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostr
tauB; taurine transport ATP-binding protein tauB
NECEvent2014_3_4_scaffold_398_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7097..8131)
DNA (1035bp) protein (345aa)
Taurine-binding periplasmic protein n=2 Tax=Clostridium butyricum RepID=B1QZI1_CLOBU rbh
Taurine-binding periplasmic protein (Sulfate starvation-induced protein 1) (SSI1) {ECO:0000313|EMBL:EEP53884.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
taurine-binding periplasmic protein precursor
NECEvent2014_3_4_scaffold_398_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8165..8950)
DNA (786bp) protein (262aa)
Taurine transport system permease protein TauC n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JLM1_CLOBU rbh
Taurine transport system permease protein TauC {ECO:0000313|EMBL:ETI89465.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
tauC; taurine transport system permease protein tauC
NECEvent2014_3_4_scaffold_398_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9306..10475)
DNA (1170bp) protein (390aa)
Transcriptional regulator, PucR family n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K860_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ89043.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
PucR family transcriptional regulator
NECEvent2014_3_4_scaffold_398_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10594..10932)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z0Z7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33596.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
nifI5; nitrogen regulatory protein PII
NECEvent2014_3_4_scaffold_398_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10945..11271)
DNA (327bp) protein (109aa)
Nitrogen regulatory protein P-II n=3 Tax=Clostridium butyricum RepID=B1QZI5_CLOBU
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:EEP54179.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 s
nitrogen regulatory protein P-II
NECEvent2014_3_4_scaffold_398_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11408..12757)
DNA (1350bp) protein (450aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JMW4_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ89024.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
diguanylate cyclase/phosphodiesterase
NECEvent2014_3_4_scaffold_398_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12744..13058)
DNA (315bp) protein (105aa)
UPI0003D5DFF8 related cluster n=1 Tax=unknown RepID=UPI0003D5DFF8
Uncharacterized protein {ECO:0000313|EMBL:KJZ89024.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
diguanylate cyclase/phosphodiesterase
NECEvent2014_3_4_scaffold_398_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13229..13840)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ALF3_CLOBU rbh
Galactoside O-acetyltransferase {ECO:0000313|EMBL:KHD15988.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
maltose O-acetyltransferase
NECEvent2014_3_4_scaffold_398_19
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14010..15713)
DNA (1704bp) protein (568aa)
oligo-1,6-glucosidase (EC:3.2.1.10)
UPI0003D64795 related cluster n=1 Tax=unknown RepID=UPI0003D64795 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ91959.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
NECEvent2014_3_4_scaffold_398_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15834..15986)
DNA (153bp) protein (51aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QZI9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ89060.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_3_4_scaffold_398_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15997..16488)
DNA (492bp) protein (164aa)
Probable thiol peroxidase {ECO:0000256|HAMAP-Rule:MF_00269}; EC=1.11.1.- {ECO:0000256|HAMAP-Rule:MF_00269};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clo
putative thiol peroxidase (EC:1.11.1.-)
Probable thiol peroxidase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JCF8_CLOBU rbh
Displaying 22 items

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