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NECEvent2014_3_4_scaffold_461

Alias: 173_002_scaffold_461

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_4_scaffold_461_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(284..859)
DNA (576bp) protein (192aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=R0ABZ7_CLOBU rbh
Putative sporulation protein YyaC {ECO:0000313|EMBL:EEP52445.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4
yyaC3; putative sporulation protein YyaC
NECEvent2014_3_4_scaffold_461_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(916..2067)
DNA (1152bp) protein (384aa)
Cysteine desulfurase {ECO:0000313|EMBL:KJZ87028.1}; EC=2.8.1.7 {ECO:0000313|EMBL:KJZ87028.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
csd3; cysteine desulfurase Csd (EC:2.8.1.7)
Cysteine desulfurase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YSA1_CLOBU rbh
NECEvent2014_3_4_scaffold_461_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2121..2768)
DNA (648bp) protein (216aa)
LysE type translocator n=4 Tax=Clostridium butyricum RepID=B1QSP3_CLOBU rbh
Translocator protein, LysE family {ECO:0000313|EMBL:KJZ87030.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C
putative threonine efflux protein
NECEvent2014_3_4_scaffold_461_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2921..3160
DNA (240bp) protein (80aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JFL3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30292.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein DUF3343
NECEvent2014_3_4_scaffold_461_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3184..4086
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A1E5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ30293.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
mechanosensitive ion channel family protein
NECEvent2014_3_4_scaffold_461_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4086..4280
DNA (195bp) protein (65aa)
Conserved domain protein n=4 Tax=Clostridium butyricum RepID=B1QSP6_CLOBU
Conserved domain protein {ECO:0000313|EMBL:EEP52436.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
hypothetical protein
NECEvent2014_3_4_scaffold_461_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


4382..4669
DNA (288bp) protein (96aa)
30S ribosomal protein S6 n=4 Tax=Clostridium butyricum RepID=B1QSP7_CLOBU
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
rpsF; 30S ribosomal protein S6
NECEvent2014_3_4_scaffold_461_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4683..5135
DNA (453bp) protein (151aa)
Single-stranded DNA-binding protein n=4 Tax=Clostridium butyricum RepID=B1QSP8_CLOBU rbh
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=997898 species="Bacteria; Firmicutes; Clostrid
single-strand binding protein
NECEvent2014_3_4_scaffold_461_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


5164..5421
DNA (258bp) protein (86aa)
30S ribosomal protein S18 n=4 Tax=Clostridium butyricum RepID=B1QSP9_CLOBU
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str.
rpsR; 30S ribosomal protein S18
NECEvent2014_3_4_scaffold_461_10
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5695..6024
DNA (330bp) protein (110aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QSQ0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ93292.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
MazG-like family
NECEvent2014_3_4_scaffold_461_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6045..7982
DNA (1938bp) protein (646aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AC06_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ30299.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
phosphoesterase domain-containing protein
NECEvent2014_3_4_scaffold_461_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


7985..8431
DNA (447bp) protein (149aa)
50S ribosomal protein L9 n=4 Tax=Clostridium butyricum RepID=B1QSQ2_CLOBU
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
rplI; 50S ribosomal protein L9
NECEvent2014_3_4_scaffold_461_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8444..10339
DNA (1896bp) protein (632aa)
lon3; Lon protease 2 (EC:3.4.21.53)
ATP-dependent protease, Lon family n=3 Tax=Clostridium butyricum RepID=B1QSQ3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ87010.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_3_4_scaffold_461_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10488..11807
DNA (1320bp) protein (440aa)
dnaC; replicative DNA helicase DnaC (EC:3.6.4.12)
Replicative DNA helicase n=2 Tax=Clostridium butyricum RepID=M8JFM2_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ87014.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Displaying 14 items

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