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NECEvent2014_3_4_scaffold_462

Alias: 173_002_scaffold_462

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_4_scaffold_462_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19..897
DNA (879bp) protein (293aa)
Transcriptional regulator, LysR family n=2 Tax=Clostridium butyricum RepID=M8KBY7_CLOBU rbh
Transcriptional regulator, MerR family {ECO:0000313|EMBL:KJZ83238.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBU
LysR family transcriptional regulator
NECEvent2014_3_4_scaffold_462_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1184..2191
DNA (1008bp) protein (336aa)
Membrane protein n=2 Tax=Clostridium butyricum RepID=M8J819_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35769.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
membrane protein
NECEvent2014_3_4_scaffold_462_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2359..3552
DNA (1194bp) protein (398aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
isocitrate dehydrogenase (EC:1.1.1.42)
UPI0003D61092 related cluster n=1 Tax=unknown RepID=UPI0003D61092 rbh
NECEvent2014_3_4_scaffold_462_trna_1
unknown

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3776..3847
DNA (72bp)
transferRNA
NECEvent2014_3_4_scaffold_462_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4120..4575
DNA (456bp) protein (152aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1QVT1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83207.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_3_4_scaffold_462_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4708..5934)
DNA (1227bp) protein (409aa)
Aminopeptidase S (Leu, Val, Phe, Tyr preference) {ECO:0000313|EMBL:KJZ83190.1}; EC=3.4.11.24 {ECO:0000313|EMBL:KJZ83190.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clo
ampS; aminopeptidase AmpS (EC:3.4.11.-)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AUT7_CLOBU rbh
NECEvent2014_3_4_scaffold_462_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6142..9012
DNA (2871bp) protein (957aa)
polA; DNA polymerase I (EC:2.7.7.7)
DNA polymerase I n=2 Tax=Clostridium butyricum RepID=R0AHE8_CLOBU rbh
DNA polymerase I {ECO:0000313|EMBL:ENZ35778.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_3_4_scaffold_462_7
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9150..9749
DNA (600bp) protein (200aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1523156 species="Bacteria; F
coaE; dephospho-CoA kinase CoaE (EC:2.7.1.24)
Dephospho-CoA kinase n=3 Tax=Clostridium butyricum RepID=B1QVS8_CLOBU rbh
NECEvent2014_3_4_scaffold_462_8
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9764..10387
DNA (624bp) protein (208aa)
Membrane-bound lytic murein transglycosylase D {ECO:0000313|EMBL:KJZ96932.1}; EC=3.2.1.- {ECO:0000313|EMBL:KJZ96932.1};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostri
Secreted protein n=4 Tax=Clostridium butyricum RepID=B1QVS7_CLOBU rbh
soluble lytic murein transglycosylase
NECEvent2014_3_4_scaffold_462_trna_2
unknown

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10506..10588
DNA (83bp)
transferRNA
NECEvent2014_3_4_scaffold_462_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10849..11403
DNA (555bp) protein (185aa)
UPI0003D61B2D related cluster n=1 Tax=unknown RepID=UPI0003D61B2D rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI88529.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
NECEvent2014_3_4_scaffold_462_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11397..11798
DNA (402bp) protein (134aa)
UPI0003D5BD02 related cluster n=1 Tax=unknown RepID=UPI0003D5BD02
Uncharacterized protein {ECO:0000313|EMBL:ETI88530.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
Displaying 12 items

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