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NECEvent2014_3_4_scaffold_2188_1

Organism: NECEvent2014_3_4_Klebsiella_oxytoca_54_19_partial

partial RP 33 / 55 MC: 6 BSCG 30 / 51 ASCG 12 / 38 MC: 2
Location: comp(1..1101)

Top 3 Functional Annotations

Value Algorithm Source
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 367.0
  • Bit_score: 732
  • Evalue 8.30e-209
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 367.0
  • Bit_score: 732
  • Evalue 4.10e-208
DNA-directed RNA polymerase subunit beta' n=2 Tax=Klebsiella oxytoca RepID=H3N5L3_KLEOX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 367.0
  • Bit_score: 733
  • Evalue 1.00e-208

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Taxonomy

Salmonella enterica → Salmonella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1101
GTGAAAGACTTATTAAAGTTTCTGAAAGCGCAAACTAAAACCGAAGAGTTTGATGCGATCAAAATTGCTCTGGCATCGCCAGACATGATCCGTTCATGGTCTTTTGGTGAAGTTAAAAAGCCGGAAACCATTAACTACCGTACGTTCAAACCTGAGCGTGACGGCCTTTTCTGCGCGCGTATTTTCGGGCCAGTAAAAGACTACGAGTGCCTGTGCGGTAAGTACAAGCGCCTGAAACACCGCGGTGTGATCTGTGAGAAGTGCGGCGTTGAAGTGACCCAGACTAAAGTGCGCCGTGAGCGTATGGGCCACATCGAGCTGGCGTCTCCGACCGCTCATATCTGGTTCCTGAAGTCTCTGCCGTCCCGTATCGGCCTGCTTCTCGATATGCCGCTGCGCGATATCGAACGCGTGCTGTACTTCGAATCCTATGTGGTTATCGAAGGCGGTATGACCAACCTGGAACGCCAGCAGATCCTGACTGAAGAACAGTATCTGGACGCGCTGGAAGAGTTCGGTGACGAATTTGACGCGAAGATGGGTGCGGAAGCTATCCAGGCCCTGCTGAAGAGCATGGATCTGGAGCAAGAGTGTGAAACTCTGCGCGAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTAAGAAGCTGACCAAGCGTATCAAACTGCTGGAAGCGTTCGTACAGTCTGGCAACAAGCCGGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTTGCGACTTCTGACCTGAACGATCTGTATCGTCGCGTCATTAACCGTAACAACCGTCTGAAACGTCTGCTGGATCTGGCTGCGCCGGACATCATCGTACGCAACGAAAAACGTATGCTGCAGGAAGCGGTTGACGCCCTGCTGGATAACGGTCGTCGCGGTCGTGCGATCACCGGTTCTAACAAACGTCCTCTGAAATCTTTGGCCGATATGATCAAAGGTAAGCAGGGTCGTTTCCGTCAGAACCTGCTCGGTAAGCGTGTTGACTACTCCGGTCGTTCTGTAATCACCGTAGGTCCATACCTGCGTCTGCATCAGTGCGGT
PROTEIN sequence
Length: 367
VKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCARIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSLPSRIGLLLDMPLRDIERVLYFESYVVIEGGMTNLERQQILTEEQYLDALEEFGDEFDAKMGAEAIQALLKSMDLEQECETLREELNETNSETKRKKLTKRIKLLEAFVQSGNKPEWMILTVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQEAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCG