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NECEvent2014_3_4_scaffold_2188_2

Organism: NECEvent2014_3_4_Klebsiella_oxytoca_54_19_partial

partial RP 33 / 55 MC: 6 BSCG 30 / 51 ASCG 12 / 38 MC: 2
Location: comp(1178..1516)

Top 3 Functional Annotations

Value Algorithm Source
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 112.0
  • Bit_score: 229
  • Evalue 5.30e-58
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 112.0
  • Bit_score: 229
  • Evalue 2.60e-57
DNA-directed RNA polymerase subunit beta n=1 Tax=Escherichia coli P0304816.12 RepID=N3ZK61_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 112.0
  • Bit_score: 229
  • Evalue 1.90e-57

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 339
TACATGCTGAAACTGAACCACCTGGTTGATGACAAGATGCATGCGCGTTCTACCGGTTCTTACAGCCTGGTTACTCAGCAGCCGCTGGGTGGTAAGGCACAGTTCGGTGGTCAGCGCTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATATGGCGCAGCATACACCCTGCAGGAAATGCTCACCGTTAAGTCTGATGACGTGAACGGCCGTACTAAGATGTATAAGAACATCGTGGATGGCAACCATCAGATGGAACCGGGCATGCCGGAATCCTTCAACGTACTGTTGAAAGAGATTCGCTCGCTGGGCATCAACATCGAACTGGAAGACGAGTAA
PROTEIN sequence
Length: 113
YMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMPESFNVLLKEIRSLGINIELEDE*