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NECEvent2014_3_4_scaffold_166

Alias: 173_002_scaffold_166

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_4_scaffold_166_1
unknown

Not on your lists

comp(1..555)
DNA (555bp) protein (185aa)

This feature has no annotations

NECEvent2014_3_4_scaffold_166_2
unknown

Not on your lists

comp(1277..2920)
DNA (1644bp) protein (548aa)

This feature has no annotations

NECEvent2014_3_4_scaffold_166_3
unknown

Not on your lists

comp(3092..3274)
DNA (183bp) protein (61aa)

This feature has no annotations

NECEvent2014_3_4_scaffold_166_4
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3394..4437
DNA (1044bp) protein (348aa)
Putative ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZE61_9CLOT rbh
Putative ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein {ECO:0000313|EMBL:CCQ96223.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
ATPase
NECEvent2014_3_4_scaffold_166_5
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4443..5042
DNA (600bp) protein (200aa)
Response regulator receiver domain protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZDF5_9CLOT rbh
Response regulator receiver domain protein {ECO:0000313|EMBL:CCQ96224.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ult
DNA-binding response regulator
NECEvent2014_3_4_scaffold_166_6
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5561..7063
DNA (1503bp) protein (501aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. AS15 RepID=J5GTU0_9FIRM
KWG repeat-containing protein
Tax=BJP_IG2102_Clostridiales_34_350
NECEvent2014_3_4_scaffold_166_7
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7011..7220
DNA (210bp) protein (70aa)
Response regulator receiver domain protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZDF5_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:CCQ96224.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ult
NECEvent2014_3_4_scaffold_166_8
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7374..7583)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) RepID=B8FSA1_DESHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL21889.1}; TaxID=272564 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense
NECEvent2014_3_4_scaffold_166_9
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7598..7870)
DNA (273bp) protein (91aa)
Plasmid stabilization system n=1 Tax=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) RepID=B8FSA2_DESHD
plasmid stabilization system
Plasmid stabilization system {ECO:0000313|EMBL:ACL21890.1}; TaxID=272564 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafn
NECEvent2014_3_4_scaffold_166_10
Sporolactobacillus laevolacticus, Sporolactobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7996..9834)
DNA (1839bp) protein (613aa)
ABC transporter ATP-binding protein n=1 Tax=Sporolactobacillus laevolacticus DSM 442 RepID=V6J112_9BACL rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EST13527.1}; TaxID=1395513 species="Bacteria; Firmicutes; Bacilli; Bacillales; Sporolactobacillaceae; Sporolactobacillus.;" source="Sporolactobaci
ABC transporter ATP-binding protein
NECEvent2014_3_4_scaffold_166_11
Sporolactobacillus laevolacticus, Sporolactobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9845..11698)
DNA (1854bp) protein (618aa)
ABC transporter permease n=1 Tax=Sporolactobacillus laevolacticus DSM 442 RepID=V6J2V0_9BACL rbh
ABC transporter permease {ECO:0000313|EMBL:EST13526.1}; TaxID=1395513 species="Bacteria; Firmicutes; Bacilli; Bacillales; Sporolactobacillaceae; Sporolactobacillus.;" source="Sporolactobacillus laevol
ABC transporter
NECEvent2014_3_4_scaffold_166_12
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11768..12331)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JS58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS36776.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
histidine kinase-related ATPase
NECEvent2014_3_4_scaffold_166_13
Sporolactobacillus laevolacticus, Sporolactobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12492..13217)
DNA (726bp) protein (242aa)
DNA-binding protein n=1 Tax=Sporolactobacillus laevolacticus DSM 442 RepID=V6J0T9_9BACL
DNA-binding protein {ECO:0000313|EMBL:EST13523.1}; TaxID=1395513 species="Bacteria; Firmicutes; Bacilli; Bacillales; Sporolactobacillaceae; Sporolactobacillus.;" source="Sporolactobacillus laevolactic
DNA-binding response regulator
NECEvent2014_3_4_scaffold_166_14
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13214..14407)
DNA (1194bp) protein (398aa)
Putative D-alanyl-D-alanine carboxypeptidase dacF {ECO:0000313|EMBL:CCQ94514.1}; EC=3.4.16.4 {ECO:0000313|EMBL:CCQ94514.1};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clo
Putative D-alanyl-D-alanine carboxypeptidase dacF n=1 Tax=Clostridium ultunense Esp RepID=M1Z9K5_9CLOT rbh
D-Ala-D-Ala carboxypeptidase
NECEvent2014_3_4_scaffold_166_15
unknown

Not on your lists

14521..14628
DNA (108bp) protein (36aa)

This feature has no annotations

NECEvent2014_3_4_scaffold_166_16
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14660..16168)
DNA (1509bp) protein (503aa)
Peptidase M1 membrane alanine aminopeptidase n=1 Tax=Clostridium ultunense Esp RepID=M1ZA17_9CLOT rbh
Peptidase M1 membrane alanine aminopeptidase {ECO:0000313|EMBL:CCQ94513.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium u
peptidase MA superfamily
NECEvent2014_3_4_scaffold_166_17
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16258..17616)
DNA (1359bp) protein (453aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000
serS; seryl-tRNA ligase SerS (EC:6.1.1.11)
Serine--tRNA ligase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AV75_9CLOT rbh
NECEvent2014_3_4_scaffold_166_18
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18103..19515)
DNA (1413bp) protein (471aa)
two-component system signal transduction histidine kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostrid
Two-component system signal transduction histidine kinase n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AXU3_CLOA9
NECEvent2014_3_4_scaffold_166_19
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19517..20227)
DNA (711bp) protein (237aa)
transcriptional regulator n=1 Tax=Clostridium sp. JC122 RepID=UPI000288D145
Transcriptional regulator {ECO:0000313|EMBL:KIN81527.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
two-component system signal transduction response regulator
NECEvent2014_3_4_scaffold_166_20
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20294..21112)
DNA (819bp) protein (273aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum RepID=S8BT45_CLOBO rbh
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:ACO83987.1}; TaxID=536232 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Kyo
NECEvent2014_3_4_scaffold_166_21
Aminomonas paucivorans, Aminomonas, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

21417..22436
DNA (1020bp) protein (340aa)
TRAP dicarboxylate transporter, DctP subunit n=1 Tax=Aminomonas paucivorans DSM 12260 RepID=E3CXQ8_9BACT rbh
TRAP dicarboxylate transporter, DctP subunit {ECO:0000313|EMBL:EFQ22651.1}; TaxID=584708 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminomonas.;" source="Aminomonas
TRAP dicarboxylate family transporter subunit DctP
NECEvent2014_3_4_scaffold_166_22
Cloacibacillus evryensis, Cloacibacillus, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

22455..22940
DNA (486bp) protein (162aa)
TRAP transporter, DctQ-like membrane protein n=1 Tax=Filifactor alocis (strain ATCC 35896 / D40 B5) RepID=D6GQH6_FILAD
TRAP-type C4-dicarboxylate transport system, small permease component {ECO:0000313|EMBL:EXG78497.1}; TaxID=866499 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Cloaciba
C4-dicarboxylate transport system small permease
NECEvent2014_3_4_scaffold_166_23
Cloacibacillus evryensis, Cloacibacillus, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

22944..24209
DNA (1266bp) protein (422aa)
TRAP transporter, DctM subunit n=1 Tax=Eubacteriaceae bacterium OBRC8 RepID=J6HA54_9FIRM rbh
TRAP transporter, DctM subunit {ECO:0000313|EMBL:EXG78496.1}; TaxID=866499 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Cloacibacillus.;" source="Cloacibacillus evryen
hypothetical protein
NECEvent2014_3_4_scaffold_166_24
Synergistes jonesii, Synergistes, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

24242..25411
DNA (1170bp) protein (390aa)
Putative uncharacterized protein n=1 Tax=Synergistes sp. 3_1_syn1 RepID=G9PVH1_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:KEJ93004.1}; TaxID=2754 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Synergistes.;" source="Synergistes jonesii.;"
class I and II aminotransferase
NECEvent2014_3_4_scaffold_166_25
Peptoniphilus lacrimalis, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25444..27108
DNA (1665bp) protein (555aa)
Peptidase, M20/M25/M40 family {ECO:0000313|EMBL:EFA89287.1}; EC=3.4.-.- {ECO:0000313|EMBL:EFA89287.1};; TaxID=596330 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoni
hypothetical protein n=1 Tax=Peptoniphilus lacrimalis RepID=UPI00037A5DC1 rbh
peptidase M20
NECEvent2014_3_4_scaffold_166_26
Filifactor alocis, Filifactor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27121..28095
DNA (975bp) protein (325aa)
4-phosphoerythronate dehydrogenase n=1 Tax=Filifactor alocis (strain ATCC 35896 / D40 B5) RepID=D6GQH3_FILAD rbh
D-3-phosphoglycerate dehydrogenase
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:EFE29026.2}; TaxID=546269 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Filifactor.;" source="Filifactor alocis
NECEvent2014_3_4_scaffold_166_27
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28202..28879
DNA (678bp) protein (226aa)
Uncharacterized protein n=2 Tax=Blautia RepID=R5BZ77_9FIRM
GntR family transcriptional regulator
Putative uncharacterized protein {ECO:0000313|EMBL:EEG47454.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM
NECEvent2014_3_4_scaffold_166_28
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29040..30059)
DNA (1020bp) protein (340aa)
Phosphotransferase system, EIIC n=1 Tax=Clostridium ultunense Esp RepID=M1Z5N9_9CLOT rbh
Phosphotransferase system, EIIC {ECO:0000313|EMBL:CCQ92863.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.
phosphotransferase system, EIIC component
NECEvent2014_3_4_scaffold_166_29
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30126..30650)
DNA (525bp) protein (175aa)
Putative transcription repressor NiaR n=1 Tax=Clostridium ultunense Esp RepID=M1ZGH7_9CLOT
Putative transcription repressor NiaR {ECO:0000313|EMBL:CCQ92862.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunens
3H domain-containing protein
NECEvent2014_3_4_scaffold_166_30
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30785..31765)
DNA (981bp) protein (327aa)
Chromosomal replication initiator DnaA n=1 Tax=Clostridium ultunense Esp RepID=M1ZGH3_9CLOT rbh
Chromosomal replication initiator DnaA {ECO:0000313|EMBL:CCQ92857.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunen
DNA replication protein
Displaying items 1-30 of 58 in total

View Taxonomy