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NECEvent2014_3_4_scaffold_231

Alias: 173_002_scaffold_231

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_4_scaffold_231_1
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..934
DNA (933bp) protein (311aa)
Aminotransferase class V n=1 Tax=Clostridium ultunense Esp RepID=M1ZGM7_9CLOT
Aminotransferase class V {ECO:0000313|EMBL:CCQ97413.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
class V aminotransferase
NECEvent2014_3_4_scaffold_231_2
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1046..2755
DNA (1710bp) protein (570aa)
Autolysis histidine kinase LytS n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CAY2_9CLOT
Histidine kinase {ECO:0000313|EMBL:KGG80047.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.
signal transduction histidine kinase LytS
NECEvent2014_3_4_scaffold_231_3
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2733..3497
DNA (765bp) protein (255aa)
Transcriptional regulator, LytR/AlgR family n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CLA6_9CLOT
Sensory transduction protein LytT {ECO:0000313|EMBL:KGG79425.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter
LytTR family two component transcriptional regulator
NECEvent2014_3_4_scaffold_231_4
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3582..4490
DNA (909bp) protein (303aa)
Auxin Efflux Carrier n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MKN8_ALKOO rbh
auxin efflux carrier
Auxin Efflux Carrier {ECO:0000313|EMBL:ABW20370.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain OhILA
NECEvent2014_3_4_scaffold_231_5
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4535..6151
DNA (1617bp) protein (539aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZHT2_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCQ98471.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
pucR; purine catabolism regulatory protein PucR
NECEvent2014_3_4_scaffold_231_6
unknown

Not on your lists

6168..6359
DNA (192bp) protein (64aa)

This feature has no annotations

NECEvent2014_3_4_scaffold_231_7
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6352..7476
DNA (1125bp) protein (375aa)
Cyanuric acid amidohydrolase {ECO:0000313|EMBL:CCQ98470.1}; EC=3.5.2.15 {ECO:0000313|EMBL:CCQ98470.1};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostrid
barbiturase (EC:3.5.2.1)
Cyanuric acid amidohydrolase n=1 Tax=Clostridium ultunense Esp RepID=M1Z6K9_9CLOT rbh
NECEvent2014_3_4_scaffold_231_8
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7498..8712
DNA (1215bp) protein (405aa)
coda1; cytosine deaminase (EC:3.5.4.1)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZIM1_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCQ98469.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
NECEvent2014_3_4_scaffold_231_9
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8727..9980
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZIZ8_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCQ98468.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
UIT9 transporter
NECEvent2014_3_4_scaffold_231_10
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10041..11339
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZM76_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCQ98467.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
uracil-xanthine permease
NECEvent2014_3_4_scaffold_231_11
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11367..12311
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZHS8_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCQ98466.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
NECEvent2014_3_4_scaffold_231_12
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12317..13852
DNA (1536bp) protein (512aa)
Putative enzyme with acyl-CoA domain n=1 Tax=Clostridium ultunense Esp RepID=M1Z6K5_9CLOT rbh
Putative enzyme with acyl-CoA domain {ECO:0000313|EMBL:CCQ98465.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense
yahF; YahF rbh
NECEvent2014_3_4_scaffold_231_13
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13867..15282
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZIL6_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCQ98464.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
yahG; YahG
NECEvent2014_3_4_scaffold_231_14
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15292..16203
DNA (912bp) protein (304aa)
Carbamate kinase n=1 Tax=Clostridium ultunense Esp RepID=M1ZIZ5_9CLOT rbh
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
yqeA; carbamate kinase-like protein YqeA
NECEvent2014_3_4_scaffold_231_15
Fusobacterium nucleatum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

16327..17514
DNA (1188bp) protein (396aa)
N-acyl-L-amino acid amidohydrolase {ECO:0000313|EMBL:EAA24292.1}; EC=3.5.1.14 {ECO:0000313|EMBL:EAA24292.1};; TaxID=209882 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacte
N-acyl-L-amino acid amidohydrolase n=1 Tax=Fusobacterium nucleatum subsp. vincentii ATCC 49256 RepID=Q7P6B6_FUSNV rbh
amidohydrolase
NECEvent2014_3_4_scaffold_231_16
Paenibacillus sp. IHB B 3415, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17629..17937
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Bacillus massiliosenegalensis RepID=UPI0002EDC9BA
MerR family transcriptional regulator {ECO:0000313|EMBL:KHL96947.1}; TaxID=867080 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. IHB B
MerR family transcriptional regulator
NECEvent2014_3_4_scaffold_231_17
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18009..18620
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Bacillus massiliosenegalensis RepID=UPI0002FC8CCE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX42530.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394
NECEvent2014_3_4_scaffold_231_18
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18629..18919
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003819C04
ISSag8, transposase {ECO:0000313|EMBL:EGB93251.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
transposase IS4 family protein
NECEvent2014_3_4_scaffold_231_19
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19233..20333
DNA (1101bp) protein (367aa)
Thiosulfate sulfurtransferase YnjE n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VMH3_CLOBI rbh
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniens
rhodanese domain-containing protein
NECEvent2014_3_4_scaffold_231_20
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20314..20754
DNA (441bp) protein (147aa)
Putative membrane protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VKQ3_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:KGJ48191.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
membrane protein of unknown function
NECEvent2014_3_4_scaffold_231_21
Pelosinus sp. UFO1, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20851..21360)
DNA (510bp) protein (170aa)
Flavin reductase domain protein FMN-binding protein n=5 Tax=Pelosinus fermentans RepID=I8RUH1_9FIRM
flavin reductase domain protein FMN-binding protein
Flavin reductase domain protein FMN-binding protein {ECO:0000313|EMBL:AIF53218.1}; TaxID=484770 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pel
NECEvent2014_3_4_scaffold_231_22
Paenibacillus sp. FSL H7-0737, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21588..22664
DNA (1077bp) protein (359aa)
hypothetical protein n=1 Tax=Atribacteria bacterium JGI 0000059-I14 RepID=UPI000381B668
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIQ22756.1}; TaxID=1536775 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL H7-0737.;"
NECEvent2014_3_4_scaffold_231_23
Paenibacillus sp. IHBB 10380, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22645..23898
DNA (1254bp) protein (418aa)
hypothetical protein n=1 Tax=Calothrix sp. PCC 7103 RepID=UPI00030949B2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJS57227.1}; TaxID=1566358 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. IHBB 10380.;"
NECEvent2014_3_4_scaffold_231_24
Exiguobacterium mexicanum, Exiguobacterium, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23963..24874)
DNA (912bp) protein (304aa)
Membrane protein n=1 Tax=Exiguobacterium pavilionensis RW-2 RepID=U1LYY8_9BACL rbh
Membrane protein {ECO:0000313|EMBL:KGI86156.1}; TaxID=340146 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XII. Incertae Sedis; Exiguobacterium.;" source="Exiguobacterium mexic
membrane protein
NECEvent2014_3_4_scaffold_231_25
BJP_IG2069_Spirochaetales_48_31, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

25251..25919
DNA (669bp) protein (223aa)
Hydrogenase accessory protein HypB n=1 Tax=Clostridium sporogenes PA 3679 RepID=G9F2X0_CLOSG
hydrogenase nickel incorporation protein HypB
Tax=BJP_IG2069_Spirochaetales_48_31
NECEvent2014_3_4_scaffold_231_26
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25941..28628
DNA (2688bp) protein (896aa)
Putative pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) RepID=A5HYX6_CLOBH rbh
FAD dependent oxidoreductase family protein {ECO:0000313|EMBL:KIE47906.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ar
pyridine nucleotide-disulfide oxidoreductase
NECEvent2014_3_4_scaffold_231_27
BJP_IG2069_Syntrophobacterales_46_30, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28649..28990
DNA (342bp) protein (114aa)
Hydrogenase expression/synthesis HypA n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1N017_9CLOT
hydrogenase expression/synthesis HypA
Tax=BJP_IG2069_Syntrophobacterales_46_30
NECEvent2014_3_4_scaffold_231_28
Peptoniphilus indolicus, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29004..29543
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Peptoniphilus indolicus ATCC 29427 RepID=G4D1E0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGY80681.1}; TaxID=997350 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus indolicus ATCC 29
hypothetical protein
NECEvent2014_3_4_scaffold_231_29
Peptoniphilus indolicus, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29554..30147
DNA (594bp) protein (198aa)
UbiE/COQ5 methyltransferase n=1 Tax=Peptoniphilus indolicus ATCC 29427 RepID=G4D1D9_9FIRM
UbiE/COQ5 methyltransferase {ECO:0000313|EMBL:EGY80680.1}; TaxID=997350 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus indolicus ATC
methyltransferase type 11
NECEvent2014_3_4_scaffold_231_30
Desulfosporosinus sp. OT, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30383..30703
DNA (321bp) protein (107aa)
Phosphoribosyl-ATP pyrophosphohydrolase domain protein n=1 Tax=Desulfosporosinus sp. OT RepID=G2FUE0_9FIRM
Phosphoribosyl-ATP pyrophosphohydrolase domain protein {ECO:0000313|EMBL:EGW38725.1}; TaxID=913865 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source
hypothetical protein
Displaying items 1-30 of 41 in total

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