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NECEvent2014_3_4_scaffold_283

Alias: 173_002_scaffold_283

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_4_scaffold_283_1
BJP_IG2069_Anaerolineales_43_63, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

1..516
DNA (516bp) protein (172aa)
Efflux ABC transporter, permease protein n=1 Tax=Catonella morbi ATCC 51271 RepID=V2Y6D7_9FIRM
Tax=BJP_IG2069_Anaerolineales_43_63
NECEvent2014_3_4_scaffold_283_2
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

Not on your lists

536..1201
DNA (666bp) protein (222aa)
yclH; putative ABC transporter ATP-binding protein YclH Tax=GWC2_Chloroflexi_49_37_curated
yclH; putative ABC transporter ATP-binding protein YclH
NECEvent2014_3_4_scaffold_283_3
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1262..3082
DNA (1821bp) protein (607aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9ZD06_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ17952.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
ABC transporter
NECEvent2014_3_4_scaffold_283_4
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

3086..4501
DNA (1416bp) protein (472aa)
Peptidase family S8/S53 n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6HZX9_9FIRM
Peptidase family S8/S53 {ECO:0000313|EMBL:CDB31362.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
subtilase family
NECEvent2014_3_4_scaffold_283_5
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4527..5114
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ASQ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOC99696.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimati
NECEvent2014_3_4_scaffold_283_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5171..5641)
DNA (471bp) protein (157aa)
YbaK / prolyl-tRNA synthetases associated domain protein n=1 Tax=Clostridium difficile CD69 RepID=T3AA67_CLODI
regulatory protein
Putative regulatory protein {ECO:0000313|EMBL:CBE03051.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium di
NECEvent2014_3_4_scaffold_283_7
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5799..6722)
DNA (924bp) protein (308aa)
Pseudouridine-5'-phosphate glycosidase {ECO:0000256|HAMAP-Rule:MF_01876}; Short=PsiMP glycosidase {ECO:0000256|HAMAP-Rule:MF_01876};; EC=4.2.1.70 {ECO:0000256|HAMAP-Rule:MF_01876};; TaxID=1105031 spec
Pseudouridine-5'-phosphate glycosidase n=1 Tax=Clostridium sp. MSTE9 RepID=J0N7X1_9CLOT rbh
Indigoidine synthase A family protein
NECEvent2014_3_4_scaffold_283_8
Cetobacterium somerae, Cetobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(6724..7650)
DNA (927bp) protein (309aa)
MarR family transcriptional regulator n=1 Tax=Clostridium sporosphaeroides RepID=UPI0003644E33
HTH domain protein {ECO:0000313|EMBL:ERT69604.1}; TaxID=1319815 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Cetobacterium.;" source="Cetobacterium somerae ATCC BAA-474.;"
PfkB domain-containing protein
NECEvent2014_3_4_scaffold_283_9
Pyramidobacter piscolens, Pyramidobacter, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(7975..9441)
DNA (1467bp) protein (489aa)
Transporter gate domain protein n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y408_9BACT rbh
Transporter gate domain protein {ECO:0000313|EMBL:EFB90965.1}; TaxID=352165 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Pyramidobacter.;" source="Pyramidobacter pisco
nucleoside recognition domain-containing protein rbh
NECEvent2014_3_4_scaffold_283_10
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9479..10438)
DNA (960bp) protein (320aa)
agmatinase (EC:3.5.3.11)
Agmatinase n=8 Tax=Clostridium RepID=N9Z8D1_9CLOT rbh
Agmatinase {ECO:0000313|EMBL:ENZ16307.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
NECEvent2014_3_4_scaffold_283_11
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10642..12105)
DNA (1464bp) protein (488aa)
PAS modulated sigma54 specific transcriptional regulator, Fis family n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CLS4_SYNLT rbh
PAS modulated sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:KDR94428.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Pepto
Fis family PAS modulated sigma-54 specific transcriptional regulator
NECEvent2014_3_4_scaffold_283_12
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12289..12603
DNA (315bp) protein (105aa)
Transcriptional regulator, HxlR family n=15 Tax=Clostridium botulinum RepID=E8ZNL9_CLOB0
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:ACA45020.1}; TaxID=498213 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (s
NECEvent2014_3_4_scaffold_283_13
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12892..13593
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HBW0_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH96512.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Pirin-related protein
NECEvent2014_3_4_scaffold_283_14
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13609..14208
DNA (600bp) protein (200aa)
Nitroreductase n=1 Tax=Clostridium sp. DL-VIII RepID=G7M5B1_9CLOT rbh
Nitroreductase family protein {ECO:0000313|EMBL:KIE46601.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC
hypothetical protein
NECEvent2014_3_4_scaffold_283_15
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14268..14999)
DNA (732bp) protein (244aa)
Arginine ABC transporter ATP-binding protein ArtM n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AYC8_CLOA9 rbh
Glutamine ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGG80694.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Calora
artM; arginine ABC transporter ATP-binding protein ArtM
NECEvent2014_3_4_scaffold_283_16
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

Not on your lists

comp(14968..15639)
DNA (672bp) protein (224aa)
polar amino acid ABC transporter inner membrane subunit; K02029 polar amino acid transport system permease protein Tax=GWB2_Clostridiales_37_7_curated
His/Glu/Gln/Arg/opine ABC transporter permease
NECEvent2014_3_4_scaffold_283_17
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

Not on your lists

comp(15724..16518)
DNA (795bp) protein (265aa)
polar amino acid ABC transporter amino acid-binding protein Tax=GWB2_Clostridiales_37_7_curated
amino acid abc transporter, amino acid-binding protein
NECEvent2014_3_4_scaffold_283_18
Treponema phagedenis, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(16763..17629)
DNA (867bp) protein (289aa)
Putative membrane protein n=1 Tax=Treponema phagedenis F0421 RepID=E7NTC3_TREPH
Putative membrane protein {ECO:0000313|EMBL:CEM62921.1}; TaxID=162 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema phagedenis.;"
hypothetical protein
NECEvent2014_3_4_scaffold_283_19
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18050..19396
DNA (1347bp) protein (449aa)
(Re)-citrate synthase (EC:2.3.3.3)
HMGL-related enzyme n=1 Tax=Clostridium ultunense Esp RepID=M1ZEG5_9CLOT rbh
HMGL-related enzyme {ECO:0000313|EMBL:CCQ96669.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
NECEvent2014_3_4_scaffold_283_20
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19419..21335
DNA (1917bp) protein (639aa)
aco; aconitate hydratase Aco (EC:4.2.1.3) rbh
Aconitate hydratase Aco {ECO:0000313|EMBL:AFS78198.1}; EC=4.2.1.3 {ECO:0000313|EMBL:AFS78198.1};; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostr
Aconitate hydratase Aco n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AWJ0_CLOA9 rbh
NECEvent2014_3_4_scaffold_283_21
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21338..22345
DNA (1008bp) protein (336aa)
Putative isocitrate dehydrogenase (NAD) subunit alpha, mitochondrial {ECO:0000313|EMBL:CCQ96672.1}; EC=1.1.1.41 {ECO:0000313|EMBL:CCQ96672.1};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia;
leuB1; 3-isopropylmalate dehydrogenase (EC:1.1.1.85)
Putative isocitrate dehydrogenase (NAD) subunit alpha, mitochondrial n=1 Tax=Clostridium ultunense Esp RepID=M1ZL67_9CLOT rbh
NECEvent2014_3_4_scaffold_283_22
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22346..25780
DNA (3435bp) protein (1145aa)
Pyruvate carboxylase {ECO:0000256|PIRNR:PIRNR001594}; EC=6.4.1.1 {ECO:0000256|PIRNR:PIRNR001594};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;
pyc; pyruvate carboxylase Pyc (EC:6.4.1.1)
Pyruvate carboxylase n=1 Tax=Clostridium ultunense Esp RepID=M1ZF15_9CLOT rbh
NECEvent2014_3_4_scaffold_283_23
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25912..26763
DNA (852bp) protein (284aa)
Membrane protein n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I730_9CLOT rbh
Membrane protein {ECO:0000313|EMBL:ETA81029.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
hypothetical protein
NECEvent2014_3_4_scaffold_283_24
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26879..27073
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CIA8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KAJ52696.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.
hypothetical protein
NECEvent2014_3_4_scaffold_283_25
unknown

Not on your lists

27113..27256
DNA (144bp) protein (48aa)

This feature has no annotations

NECEvent2014_3_4_scaffold_283_26
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27615..28148
DNA (534bp) protein (178aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MIT7_ALKOO
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABW19719.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphil
NECEvent2014_3_4_scaffold_283_27
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28135..29235
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MIT6_ALKOO rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW19718.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain Oh
NECEvent2014_3_4_scaffold_283_28
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29369..30268
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8ML98_ALKOO rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW17915.1}; Flags: Precursor;; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus or
NECEvent2014_3_4_scaffold_283_29
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30496..30960
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Clostridium intestinale URNW RepID=U2N4X4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERK30537.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
Displaying 29 items

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