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NECEvent2014_3_4_scaffold_322

Alias: 173_002_scaffold_322

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_4_scaffold_322_1
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..754
DNA (753bp) protein (251aa)
Two-component response regulator n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AZS3_CLOA9 rbh
two-component response regulator
Two-component response regulator {ECO:0000313|EMBL:AFS78220.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906
NECEvent2014_3_4_scaffold_322_2
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

758..1981
DNA (1224bp) protein (408aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostrid
Sensor signal transduction histidine kinase n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B0P7_CLOA9 rbh
sensor signal transduction histidine kinase rbh
NECEvent2014_3_4_scaffold_322_3
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2105..2797
DNA (693bp) protein (231aa)
ABC transporter ATP-binding protein (EC:3.6.3.-)
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AFS78222.1}; EC=3.6.3.- {ECO:0000313|EMBL:AFS78222.1};; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" so
ABC transporter ATP-binding protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AZL4_CLOA9 rbh
NECEvent2014_3_4_scaffold_322_4
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2784..5411
DNA (2628bp) protein (876aa)
ABC transporter permease protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AWL8_CLOA9 rbh
ABC transporter permease protein {ECO:0000313|EMBL:AFS78223.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906
ABC transporter permease
NECEvent2014_3_4_scaffold_322_5
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5490..6038
DNA (549bp) protein (183aa)
Transcriptional regulator, XRE family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PVT7_9CLOT
Transcriptional regulator, XRE family {ECO:0000313|EMBL:EET86634.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidi
hypothetical protein
NECEvent2014_3_4_scaffold_322_6
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6156..8525
DNA (2370bp) protein (790aa)
Formate C-acetyltransferase {ECO:0000313|EMBL:EET86633.1}; EC=2.3.1.54 {ECO:0000313|EMBL:EET86633.1};; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu
Formate C-acetyltransferase n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PVT6_9CLOT rbh
Formate C-acetyltransferase
NECEvent2014_3_4_scaffold_322_7
Clostridium kluyveri, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8572..9339
DNA (768bp) protein (256aa)
Uncharacterized protein n=2 Tax=Clostridium kluyveri RepID=B9E5C7_CLOK1 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH07702.1}; TaxID=583346 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium kluyveri (strain NBRC 1
NECEvent2014_3_4_scaffold_322_8
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9372..10331)
DNA (960bp) protein (320aa)
NADPH dehydrogenase {ECO:0000313|EMBL:ETD70237.1}; EC=1.6.99.1 {ECO:0000313|EMBL:ETD70237.1};; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
NADPH dehydrogenase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G3G9_CLOPA rbh
NADH-flavin oxidoreductase/NADH oxidase NADH
NECEvent2014_3_4_scaffold_322_9
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10599..11774
DNA (1176bp) protein (392aa)
Cystathionine beta-lyase PatB {ECO:0000313|EMBL:CCQ93851.1}; EC=4.4.1.8 {ECO:0000313|EMBL:CCQ93851.1};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostrid
Cystathionine beta-lyase PatB n=1 Tax=Clostridium ultunense Esp RepID=M1Z753_9CLOT rbh
class I and II aminotransferase
NECEvent2014_3_4_scaffold_322_10
[Clostridium] hiranonis, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11807..12610
DNA (804bp) protein (268aa)
ABC transporter, substrate-binding protein, family 3 n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G140_9FIRM rbh
ABC transporter, substrate-binding protein, family 3 {ECO:0000313|EMBL:EEA84446.1}; TaxID=500633 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" so
yxeM; amino acid ABC transporter substrate-binding protein YxeM
NECEvent2014_3_4_scaffold_322_11
[Clostridium] hiranonis, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12620..13300
DNA (681bp) protein (227aa)
ABC transporter, permease protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G141_9FIRM rbh
ABC transporter, permease protein {ECO:0000313|EMBL:EEA84447.1}; TaxID=500633 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium]
yxeN; amino acid ABC transporter permease protein YxeN
NECEvent2014_3_4_scaffold_322_12
[Clostridium] hiranonis, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13297..14037
DNA (741bp) protein (247aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G142_9FIRM rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEA84448.1}; TaxID=500633 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridi
polar amino acid ABC transporter ATP-binding protein
NECEvent2014_3_4_scaffold_322_13
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14112..15347)
DNA (1236bp) protein (412aa)
Aminopeptidase AmpS {ECO:0000313|EMBL:CCQ97084.1}; EC=3.4.11.- {ECO:0000313|EMBL:CCQ97084.1};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
aminopeptidase II (EC:3.4.11.-)
Aminopeptidase AmpS n=1 Tax=Clostridium ultunense Esp RepID=M1ZFG7_9CLOT rbh
NECEvent2014_3_4_scaffold_322_14
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15448..16299)
DNA (852bp) protein (284aa)
4Fe-4S binding domain protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VKD0_CLOBI rbh
4Fe-4S dicluster domain protein {ECO:0000313|EMBL:KIE44346.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense C
4Fe-4S ferredoxin
NECEvent2014_3_4_scaffold_322_15
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16292..16429)
DNA (138bp) protein (46aa)
Uncharacterized protein n=2 Tax=Clostridium bifermentans RepID=T4VKP1_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:KIE45043.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.
hypothetical protein
NECEvent2014_3_4_scaffold_322_16
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16467..17525)
DNA (1059bp) protein (353aa)
Thioredoxin domain-containing protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B268_CLOA9
Redoxin family protein {ECO:0000313|EMBL:KIE45243.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;
thioredoxin domain-containing protein
NECEvent2014_3_4_scaffold_322_17
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17665..19044)
DNA (1380bp) protein (460aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostr
Dihydrolipoyl dehydrogenase n=1 Tax=Clostridium ultunense Esp RepID=M1ZKJ5_9CLOT rbh
dihydrolipoamide dehydrogenase
NECEvent2014_3_4_scaffold_322_18
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19064..20332)
DNA (1269bp) protein (423aa)
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000313|EMBL:CCQ95561.1}; EC=2.3.1.12 {ECO:0000313|EMBL:CCQ95561.1};; TaxID=1288971 species="Bacteria; Fi
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Clostridium ultunense Esp RepID=M1ZB54_9CLOT rbh
dehydrogenase catalytic domain-containing protein
NECEvent2014_3_4_scaffold_322_19
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20348..21328)
DNA (981bp) protein (327aa)
Pyruvate dehydrogenase (E1 beta subunit) {ECO:0000313|EMBL:CCQ95560.1}; EC=1.2.4.1 {ECO:0000313|EMBL:CCQ95560.1};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiacea
Pyruvate dehydrogenase (E1 beta subunit) n=1 Tax=Clostridium ultunense Esp RepID=M1YY87_9CLOT rbh
transketolase, central region
NECEvent2014_3_4_scaffold_322_20
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21331..22413)
DNA (1083bp) protein (361aa)
Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000313|EMBL:CCQ95559.1}; EC=1.2.4.1 {ECO:0000313|EMBL:CCQ95559.1};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clos
pyruvate dehydrogenase (EC:1.2.4.1)
Pyruvate dehydrogenase E1 component subunit alpha n=1 Tax=Clostridium ultunense Esp RepID=M1ZBS8_9CLOT rbh
NECEvent2014_3_4_scaffold_322_21
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22632..23231)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum BC1 RepID=R4K1P5_CLOPA
Membrane protein {ECO:0000313|EMBL:KJS49954.1}; TaxID=1629714 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
hypothetical protein
NECEvent2014_3_4_scaffold_322_22
Bacillus azotoformans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23521..24069
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KMV2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KEF36384.1}; TaxID=1348973 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus azotoformans MEV2011.;"
hypothetical protein
NECEvent2014_3_4_scaffold_322_23
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24170..24772
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1YWS2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ95040.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
NECEvent2014_3_4_scaffold_322_24
unknown

Not on your lists

24715..24912
DNA (198bp) protein (66aa)

This feature has no annotations

Displaying 24 items

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