ggKbase home page

NECEvent2014_3_4_scaffold_329

Alias: 173_002_scaffold_329

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_4_scaffold_329_1
unknown

Not on your lists

3..134
DNA (132bp) protein (44aa)

This feature has no annotations

NECEvent2014_3_4_scaffold_329_2
Desulfitobacterium dehalogenans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

121..1416
DNA (1296bp) protein (432aa)
hypothetical protein n=1 Tax=Desulfitobacterium sp. PCE1 RepID=UPI000361E9F6 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL98970.1}; TaxID=756499 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dehalogen
NECEvent2014_3_4_scaffold_329_3
Haloplasma contractile, Haloplasma, Haloplasmatales, Bacteria

Not on your lists

1822..2286
DNA (465bp) protein (155aa)
Acetyltransferase GNAT family protein {ECO:0000313|EMBL:ERJ12228.1}; EC=2.3.1.158 {ECO:0000313|EMBL:ERJ12228.1};; TaxID=1033810 species="Bacteria; Haloplasmatales; Haloplasmataceae; Haloplasma.;" sour
Acetyltransferase GNAT family protein n=1 Tax=Haloplasma contractile SSD-17B RepID=F7Q1W1_9BACT
hypothetical protein
NECEvent2014_3_4_scaffold_329_4
Lysinibacillus sinduriensis, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2607..3617
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Lysinibacillus boronitolerans RepID=UPI0002E189B4 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGR76167.1}; TaxID=1384057 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus sinduriensis BLB-1 = JCM
hypothetical protein
NECEvent2014_3_4_scaffold_329_5
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3991..5172
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0MW03_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB86809.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
N-acetyltransferase GCN5
NECEvent2014_3_4_scaffold_329_6
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5615..6679
DNA (1065bp) protein (355aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" sou
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CS62_9FIRM
GTPase EngC
NECEvent2014_3_4_scaffold_329_7
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7144..7788
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VPW3_CLOSH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC68719.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium su
NECEvent2014_3_4_scaffold_329_8
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7811..8953
DNA (1143bp) protein (381aa)
sodium ion-translocating decarboxylase subunit beta (EC:4.1.1.70)
Sodium ion-translocating decarboxylase, beta subunit n=1 Tax=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) RepID=A4XMC4_CALS8
Glutaconyl-CoA decarboxylase subunit beta {ECO:0000313|EMBL:KEZ87706.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;
NECEvent2014_3_4_scaffold_329_9
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9013..10593
DNA (1581bp) protein (527aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostr
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MM03_ALKOO rbh
integral membrane sensor signal transduction histidine kinase
NECEvent2014_3_4_scaffold_329_10
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10695..11396
DNA (702bp) protein (234aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MM04_ALKOO rbh
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:EXG86023.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiac
two component transcriptional regulator
NECEvent2014_3_4_scaffold_329_11
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11727..12032
DNA (306bp) protein (102aa)
Transcriptional regulator, AbrB family n=4 Tax=Clostridium botulinum RepID=A7FVC0_CLOB1
Transcriptional regulator, AbrB family domain protein {ECO:0000313|EMBL:KIE47721.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clos
AbrB family transcriptional regulator
NECEvent2014_3_4_scaffold_329_12
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12022..13209
DNA (1188bp) protein (396aa)
Glycosyltransferase, MGT family n=1 Tax=Clostridium botulinum (strain Loch Maree / Type A3) RepID=B1KUW5_CLOBM rbh
Glycosyltransferase, MGT family protein {ECO:0000313|EMBL:KIE47909.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argent
glycosyl transferase family protein
NECEvent2014_3_4_scaffold_329_13
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13535..16978)
DNA (3444bp) protein (1148aa)
Putative uncharacterized protein n=1 Tax=Clostridium sporogenes PA 3679 RepID=G9EVP7_CLOSG rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHN16621.1}; TaxID=1075091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes PA
hypothetical protein
NECEvent2014_3_4_scaffold_329_14
Natranaerobius thermophilus, Natranaerobius, Natranaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17286..18470)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A0Y5_NATTJ rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB84608.1}; TaxID=457570 species="Bacteria; Firmicutes; Clostridia; Natranaerobiales; Natranaerobiaceae; Natranaerobius.;" source="Natranaerobius thermophilu
NECEvent2014_3_4_scaffold_329_15
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18460..18954)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0N7P8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQB87756.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
ECF subfamily RNA polymerase sigma-24 subunit
NECEvent2014_3_4_scaffold_329_16
Alkalibacterium sp. AK22, Alkalibacterium, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19217..19708
DNA (492bp) protein (164aa)
Phosphatidylglycerophosphatase B {ECO:0000313|EMBL:EXJ22981.1}; EC=3.1.3.27 {ECO:0000313|EMBL:EXJ22981.1};; TaxID=1229520 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Al
Membrane-associated phospholipid phosphatase n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SXY5_ROSHA
membrane-associated phospholipid phosphatase
NECEvent2014_3_4_scaffold_329_17
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19917..20246
DNA (330bp) protein (110aa)
Protein secretion chaperonin CsaA n=1 Tax=Clostridium botulinum (strain H04402 065 / Type A5) RepID=E8ZVY6_CLOB0
protein secretion chaperonin CsaA
Export-related chaperone CsaA {ECO:0000313|EMBL:EDU38453.1}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes ATCC 1
NECEvent2014_3_4_scaffold_329_18
Selenomonas ruminantium, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20684..21343)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 / TAM6421) RepID=I0GQP9_SELRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL83086.1}; TaxID=927704 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas ruminantium subsp
NECEvent2014_3_4_scaffold_329_19
Vagococcus lutrae, Vagococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21564..22457
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Paenibacillus sp. OSY-SE RepID=UPI000303E726
Uncharacterized protein {ECO:0000313|EMBL:EST89299.1}; TaxID=1408226 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Vagococcus.;" source="Vagococcus lutrae LBD1.;"
membrane protein
NECEvent2014_3_4_scaffold_329_20
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22490..23695
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AC19_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EFD00604.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
NECEvent2014_3_4_scaffold_329_21
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23776..24210)
DNA (435bp) protein (145aa)
Ferritin Dps family protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MEQ2_ALKOO
ferritin Dps family protein
Ferritin Dps family protein {ECO:0000313|EMBL:ABW18381.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strai
Displaying 21 items

View Taxonomy