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NECEvent2014_3_4_scaffold_393

Alias: 173_002_scaffold_393

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_4_scaffold_393_1
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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363..2327
DNA (1965bp) protein (655aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:000
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonyl-tRNA synthase n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I5J0_9CLOT
NECEvent2014_3_4_scaffold_393_2
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2483..4042)
DNA (1560bp) protein (520aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clost
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Clostridium ultunense Esp RepID=M1Z7S3_9CLOT rbh
ATP-dependent metalloprotease FtsH
NECEvent2014_3_4_scaffold_393_3
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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4178..5575
DNA (1398bp) protein (466aa)
Xaa-His dipeptidase (EC:3.4.13.3)
Acetylornithine deacetylase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CF39_9CLOT rbh
Diguanylate cyclase {ECO:0000313|EMBL:KGG80360.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H532
NECEvent2014_3_4_scaffold_393_4
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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5828..6403
DNA (576bp) protein (192aa)
Translation initiation factor IF-3 n=1 Tax=Peptostreptococcaceae bacterium oral taxon 113 str. W5053 RepID=U2JYN0_9FIRM
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaero
translation initiation factor IF-3
NECEvent2014_3_4_scaffold_393_5
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

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6420..6611
DNA (192bp) protein (64aa)
50S ribosomal protein L35 n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI00031D348F
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Se
rpmI; 50S ribosomal protein L35
NECEvent2014_3_4_scaffold_393_6
Peptoniphilus sp. oral taxon 386, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6645..6998
DNA (354bp) protein (118aa)
50S ribosomal protein L20 n=1 Tax=Peptoniphilus sp. oral taxon 386 str. F0131 RepID=D7N637_9FIRM
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=575609 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" so
rplT; ribosomal protein L20
NECEvent2014_3_4_scaffold_393_7
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7122..8465
DNA (1344bp) protein (448aa)
Ktr system potassium uptake protein B n=1 Tax=Clostridium ultunense Esp RepID=M1YPY1_9CLOT rbh
Ktr system potassium uptake protein B {ECO:0000313|EMBL:CCQ92605.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunens
ktrB; Ktr system potassium uptake protein B
NECEvent2014_3_4_scaffold_393_8
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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8481..9137
DNA (657bp) protein (219aa)
Potassium uptake protein, integral membrane component, KtrA n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RQH9_9CLOT
Potassium transporter Trk {ECO:0000313|EMBL:KGG80351.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensi
TrkA domain-containing protein
NECEvent2014_3_4_scaffold_393_9
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9100..9933
DNA (834bp) protein (278aa)
spoU1; tRNA/rRNA methyltransferase SpoU (EC:2.1.1.-)
RNA methyltransferase, TrmH family, group 3 n=1 Tax=Clostridium ultunense Esp RepID=M1ZFW2_9CLOT rbh
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:CCQ92602.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ul
NECEvent2014_3_4_scaffold_393_10
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10048..11082
DNA (1035bp) protein (345aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
pheS; phenylalanyl-tRNA ligase subunit alpha PheS (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Clostridium ultunense Esp RepID=M1Z3J1_9CLOT rbh
NECEvent2014_3_4_scaffold_393_11
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11103..13496
DNA (2394bp) protein (798aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
pheT; phenylalanyl-tRNA ligase subunit beta PheT (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Clostridium ultunense Esp RepID=M1YPX7_9CLOT rbh
NECEvent2014_3_4_scaffold_393_12
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13595..14167
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1Z4B6_9CLOT
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
zapA; cell division protein ZapA
NECEvent2014_3_4_scaffold_393_13
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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14173..16587
DNA (2415bp) protein (805aa)
Protease n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AWC6_9CLOT rbh
Protease {ECO:0000313|EMBL:EOD00927.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
peptidase U32
Displaying 13 items

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