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NECEvent2014_3_4_scaffold_429

Alias: 173_002_scaffold_429

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_4_scaffold_429_1
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..1263)
DNA (1263bp) protein (421aa)
GTPase HflX n=1 Tax=Clostridium ultunense Esp RepID=M1Z4S5_9CLOT rbh
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clost
GTP-binding protein
NECEvent2014_3_4_scaffold_429_2
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1506..4415
DNA (2910bp) protein (970aa)
pbpA2; Penicillin-binding protein 1A (EC:2.4.1.- 3.4.-.-)
Transglycosylase n=1 Tax=Clostridium ultunense Esp RepID=M1YPS4_9CLOT rbh
Transglycosylase {ECO:0000313|EMBL:CCQ92550.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
NECEvent2014_3_4_scaffold_429_3
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4425..4781)
DNA (357bp) protein (119aa)
Stage V sporulation protein AEB n=1 Tax=Clostridium ultunense Esp RepID=M1Z3D7_9CLOT
Stage V sporulation protein AEB {ECO:0000313|EMBL:CCQ92551.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.
spoVAE; stage V sporulation protein AE
NECEvent2014_3_4_scaffold_429_4
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4792..5811)
DNA (1020bp) protein (340aa)
Stage V sporulation protein AD n=1 Tax=Clostridium ultunense Esp RepID=M1ZFR8_9CLOT rbh
Stage V sporulation protein AD {ECO:0000313|EMBL:CCQ92552.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;
spoVAD; stage V sporulation protein AD
NECEvent2014_3_4_scaffold_429_5
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5816..6265)
DNA (450bp) protein (150aa)
Stage V sporulation protein AC n=1 Tax=Clostridium ultunense Esp RepID=M1Z4T2_9CLOT
Stage V sporulation protein AC {ECO:0000313|EMBL:CCQ92553.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;
spoVAC; stage V sporulation protein AC
NECEvent2014_3_4_scaffold_429_6
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6280..6693)
DNA (414bp) protein (138aa)
Stage V sporulation protein AB n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AXZ1_9CLOT
Stage V sporulation protein AB {ECO:0000313|EMBL:EOD01512.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kir
stage V sporulation protein AB
NECEvent2014_3_4_scaffold_429_7
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6706..7329)
DNA (624bp) protein (208aa)
Putative Stage V sporulation protein AA n=1 Tax=Clostridium ultunense Esp RepID=M1YPT0_9CLOT
Putative Stage V sporulation protein AA {ECO:0000313|EMBL:CCQ92555.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultune
stage V sporulation protein AA
NECEvent2014_3_4_scaffold_429_8
unknown

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comp(7322..7486)
DNA (165bp) protein (55aa)

This feature has no annotations

NECEvent2014_3_4_scaffold_429_9
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7945..8703)
DNA (759bp) protein (253aa)
RNA polymerase sigma factor n=1 Tax=Clostridium ultunense Esp RepID=M1Z3E3_9CLOT rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
FliA/WhiG family RNA polymerase sigma factor rbh
NECEvent2014_3_4_scaffold_429_10
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8709..9131)
DNA (423bp) protein (141aa)
Anti-sigma factor (Antagonist of sigma(F)) and serine kinase {ECO:0000313|EMBL:CCQ92557.1}; EC=2.7.11.- {ECO:0000313|EMBL:CCQ92557.1};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostri
anti-sigma F factor (EC:2.7.11.1)
Anti-sigma factor (Antagonist of sigma(F)) and serine kinase n=1 Tax=Clostridium ultunense Esp RepID=M1ZFS1_9CLOT
NECEvent2014_3_4_scaffold_429_11
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9161..9496)
DNA (336bp) protein (112aa)
Anti-sigma F factor antagonist n=1 Tax=Clostridium ultunense Esp RepID=M1Z4T7_9CLOT
Anti-sigma F factor antagonist {ECO:0000256|RuleBase:RU003749}; Stage II sporulation protein {ECO:0000256|RuleBase:RU003749}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Cl
spoIIAA2; anti-sigma F factor antagonist SpoIIAA
NECEvent2014_3_4_scaffold_429_12
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9618..10463)
DNA (846bp) protein (282aa)
folD; methylenetetrahydrofolate dehydrogenase (EC:1.5.1.5)
Bifunctional protein FolD n=1 Tax=Clostridium ultunense Esp RepID=M1Z479_9CLOT rbh
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
NECEvent2014_3_4_scaffold_429_13
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10708..12126)
DNA (1419bp) protein (473aa)
sodium:proton antiporter n=1 Tax=Clostridium sp. JC122 RepID=UPI0002883323 rbh
Sodium:proton antiporter {ECO:0000313|EMBL:KEZ86192.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
Na+/H+ antiporter NhaC
NECEvent2014_3_4_scaffold_429_14

Not on your lists

comp(12488..13645)
DNA (1158bp) protein (386aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN60437.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
saccharopine dehydrogenase
Displaying 14 items

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