ggKbase home page

NECEvent2014_3_4_scaffold_432

Alias: 173_002_scaffold_432

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_4_scaffold_432_1
unknown

Not on your lists

261..398
DNA (138bp) protein (46aa)

This feature has no annotations

NECEvent2014_3_4_scaffold_432_2
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1771..2454)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5EZH6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ15040.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
quaternary ammonium compound-resistance protein
NECEvent2014_3_4_scaffold_432_3
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2755..3027)
DNA (273bp) protein (91aa)
Putative uncharacterized protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TSI7_ALKMQ
Uncharacterized protein {ECO:0000313|EMBL:KJF27397.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
hypothetical protein
NECEvent2014_3_4_scaffold_432_4
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3057..3518)
DNA (462bp) protein (154aa)
MATE efflux family protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TSI8_ALKMQ
Multidrug transporter MATE {ECO:0000313|EMBL:KJF27396.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
MATE efflux family protein
NECEvent2014_3_4_scaffold_432_5
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3941..4189)
DNA (249bp) protein (83aa)
Transglycosylase-associated protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MLV5_ALKOO
transglycosylase-associated protein
Transglycosylase-associated protein {ECO:0000313|EMBL:ABW18122.1}; Flags: Precursor;; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alk
NECEvent2014_3_4_scaffold_432_6
unknown

Not on your lists

comp(4732..4929)
DNA (198bp) protein (66aa)

This feature has no annotations

NECEvent2014_3_4_scaffold_432_7
BJP_08E140C01_Anaerolineales_40_8, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(5625..6164)
DNA (540bp) protein (180aa)
Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67PE8_SYMTH
hypothetical protein
Tax=BJP_08E140C01_Anaerolineales_40_8
NECEvent2014_3_4_scaffold_432_8
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6931..7047)
DNA (117bp) protein (39aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI000360357F
DNA polymerase, beta domain-containing protein region
Nucleotidyltransferase {ECO:0000313|EMBL:KEH92774.1}; TaxID=1443126 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum C/D str. It1.
NECEvent2014_3_4_scaffold_432_9
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7370..7528)
DNA (159bp) protein (53aa)
Radical SAM domain protein n=1 Tax=Pelosinus fermentans JBW45 RepID=I8TY19_9FIRM
Radical SAM domain protein
Radical SAM domain protein {ECO:0000313|EMBL:AJQ26176.1}; TaxID=1192197 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans JBW45.
NECEvent2014_3_4_scaffold_432_10
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7715..7873)
DNA (159bp) protein (53aa)
Radical SAM domain protein n=1 Tax=Pelosinus fermentans JBW45 RepID=I8TY19_9FIRM
Clostridium botulinum B2 450 B2_450_contig007, whole genome shotgun sequence {ECO:0000313|EMBL:KIS24957.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
Radical SAM domain protein
NECEvent2014_3_4_scaffold_432_11
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7900..8055)
DNA (156bp) protein (52aa)
Radical SAM domain protein n=1 Tax=Clostridium botulinum Bf RepID=B1QN44_CLOBO
radical SAM domain-containing protein
Radical SAM superfamily protein {ECO:0000313|EMBL:AJE11017.1}; TaxID=1408283 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum CDC_
NECEvent2014_3_4_scaffold_432_12
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8073..8513)
DNA (441bp) protein (147aa)
B3/4 domain protein n=2 Tax=Clostridium botulinum RepID=C3KZI8_CLOB6
Clostridium botulinum B2 450 B2_450_contig007, whole genome shotgun sequence {ECO:0000313|EMBL:KIS22832.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
B3/4 domain-containing protein
NECEvent2014_3_4_scaffold_432_13
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8568..8792)
DNA (225bp) protein (75aa)
B3/4 domain-containing protein n=1 Tax=Clostridium botulinum A1 str. CFSAN002368 RepID=S8BEK4_CLOBO
Clostridium botulinum B2 450 B2_450_contig007, whole genome shotgun sequence {ECO:0000313|EMBL:KIS22832.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
B3/4 domain-containing protein
NECEvent2014_3_4_scaffold_432_14
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9131..9268)
DNA (138bp) protein (46aa)
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TW01_ALKMQ
pyridoxamine 5'-phosphate oxidase-like protein
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding {ECO:0000313|EMBL:ABR50369.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alk
NECEvent2014_3_4_scaffold_432_15
unknown

Not on your lists

comp(9759..9929)
DNA (171bp) protein (57aa)

This feature has no annotations

NECEvent2014_3_4_scaffold_432_16
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10331..10993)
DNA (663bp) protein (221aa)
Methyltransferase, UbiE/COQ5 family, selenocysteine-containing n=2 Tax=Clostridium botulinum RepID=B1IF87_CLOBK rbh
UbiE/COQ5 family methlytransferase
Methyltransferase, UbiE/COQ5 family, selenocysteine-containing {ECO:0000313|EMBL:ACA45758.1}; TaxID=498213 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sour
NECEvent2014_3_4_scaffold_432_17
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10990..11346)
DNA (357bp) protein (119aa)
ArsR family transcriptional regulator n=1 Tax=Clostridium sporogenes PA 3679 RepID=G9EY32_CLOSG
ArsR family transcriptional regulator {ECO:0000313|EMBL:EHN16089.1}; TaxID=1075091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogen
putative transcriptional regulator
NECEvent2014_3_4_scaffold_432_18
Caldicellulosiruptor kristjanssonii, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11738..11902)
DNA (165bp) protein (55aa)
Transcriptional repressor, LexA family n=1 Tax=Caldicellulosiruptor kristjanssonii (strain ATCC 700853 / DSM 12137 / I77R1B) RepID=E4S5C4_CALKI
transcriptional repressor, lexa family
Transcriptional repressor, LexA family {ECO:0000313|EMBL:ADQ41558.1}; TaxID=632335 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis;
NECEvent2014_3_4_scaffold_432_19
Dethiosulfovibrio peptidovorans, Dethiosulfovibrio, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(12049..12585)
DNA (537bp) protein (179aa)
GCN5-related N-acetyltransferase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=D2Z6K7_9BACT
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EFC91104.1}; TaxID=469381 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Dethiosulfovibrio.;" source="Dethiosulfovibri
acetyltransferase
NECEvent2014_3_4_scaffold_432_20
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12659..13084)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MJ66_ALKOO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW19848.1}; Flags: Precursor;; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus or
NECEvent2014_3_4_scaffold_432_21
unknown

Not on your lists

comp(13081..13272)
DNA (192bp) protein (64aa)

This feature has no annotations

NECEvent2014_3_4_scaffold_432_22
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13450..13563)
DNA (114bp) protein (38aa)
Uncharacterized protein n=1 Tax=Clostridium intestinale URNW RepID=U2N4X4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERK30537.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
Displaying 22 items

View Taxonomy