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NECEvent2014_3_4_scaffold_435

Alias: 173_002_scaffold_435

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_4_scaffold_435_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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52..2577
DNA (2526bp) protein (842aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RCX3_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT28385.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
Hypothetical protein
NECEvent2014_3_4_scaffold_435_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2591..5995
DNA (3405bp) protein (1135aa)
Helicase domain protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BQ95_CLOPF rbh
Helicase domain protein {ECO:0000313|EMBL:EDT16150.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
DNA helicase
NECEvent2014_3_4_scaffold_435_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5964..7994
DNA (2031bp) protein (677aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RCX1_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT28169.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
conserved hypothetical protein
NECEvent2014_3_4_scaffold_435_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8175..9392
DNA (1218bp) protein (406aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae
putative type II modification methyltransferase (EC:2.1.1.37)
DNA (Cytosine-5-)-methyltransferase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HDC2_9CLOT rbh
NECEvent2014_3_4_scaffold_435_5
unknown

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9450..9698
DNA (249bp) protein (83aa)

This feature has no annotations

NECEvent2014_3_4_scaffold_435_6

Not on your lists

comp(9853..10479)
DNA (627bp) protein (209aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z6P3_CLOBU
Sigma-70 region 2 protein {ECO:0000313|EMBL:ETJ20801.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
sigma-70 region 2 domain-containing protein
NECEvent2014_3_4_scaffold_435_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10715..11128
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ARH4_CLOBU
Cell wall hydrolase {ECO:0000313|EMBL:KHD13996.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
cell wall hydrolase/autolysin
NECEvent2014_3_4_scaffold_435_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11136..11291
DNA (156bp) protein (52aa)
Cell wall hydrolase {ECO:0000313|EMBL:KHD13996.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
NECEvent2014_3_4_scaffold_435_9
unknown

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11236..11349
DNA (114bp) protein (38aa)

This feature has no annotations

NECEvent2014_3_4_scaffold_435_10
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11858..12490
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Clostridium beijerinckii RepID=UPI000316BA9D
Uncharacterized protein {ECO:0000313|EMBL:AJG99801.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium
hypothetical protein
NECEvent2014_3_4_scaffold_435_11
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12867..13187
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6Q1K2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EET84619.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
hypothetical protein
Displaying 11 items

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