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NECEvent2014_3_4_scaffold_489

Alias: 173_002_scaffold_489

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_4_scaffold_489_1
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(147..728)
DNA (582bp) protein (194aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridium botulinum (strain H04402 065 / Type A5) RepID=E8ZRT3_CLOB0
GNAT family acetyltransferase
Putative GNAT family acetyltransferase {ECO:0000313|EMBL:BAQ14075.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.
NECEvent2014_3_4_scaffold_489_2
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

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976..1482
DNA (507bp) protein (169aa)
RNA polymerase sigma factor SigV n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B0L5_CLOA9
sigV2; RNA polymerase sigma factor SigV
RNA polymerase sigma factor SigV {ECO:0000313|EMBL:AFS79578.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906
NECEvent2014_3_4_scaffold_489_3
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1475..2368
DNA (894bp) protein (298aa)
Anti-sigma(V) factor RsiV n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B317_CLOA9 rbh
rsiV; anti-sigma(V) factor RsiV
Anti-sigma(V) factor RsiV {ECO:0000313|EMBL:AFS79577.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 6
NECEvent2014_3_4_scaffold_489_4
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2454..3563)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZL80_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCQ96737.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
NECEvent2014_3_4_scaffold_489_5
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3553..4866)
DNA (1314bp) protein (438aa)
Putative Major facilitator superfamily MFS_1 n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PXK8_CLOSD rbh
Major Facilitator Superfamily protein {ECO:0000313|EMBL:KIE47605.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentin
putative Major facilitator superfamily MFS_1
NECEvent2014_3_4_scaffold_489_6
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5110..5688)
DNA (579bp) protein (193aa)
Transcriptional regulator, TetR family n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MK90_ALKOO
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABW20222.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremla
NECEvent2014_3_4_scaffold_489_7
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5894..7693
DNA (1800bp) protein (600aa)
Flavocytochrome c n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MK89_ALKOO rbh
flavocytochrome c
Flavocytochrome c {ECO:0000313|EMBL:ABW20221.1}; Flags: Precursor;; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremland
NECEvent2014_3_4_scaffold_489_8
Clostridium autoethanogenum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7904..8356
DNA (453bp) protein (151aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=U5S2L9_9CLOT
protein of unknown function DUF4342
Uncharacterized protein {ECO:0000313|EMBL:AGY78044.1}; TaxID=1341692 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium autoethanogenum DSM 10
NECEvent2014_3_4_scaffold_489_9
Clostridium autoethanogenum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8450..9133
DNA (684bp) protein (228aa)
Predicted transcriptional regulator n=2 Tax=Clostridium RepID=D8GUD1_CLOLD rbh
two component transcriptional regulator, winged helix family
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AGY78045.1}; TaxID=1341692 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
NECEvent2014_3_4_scaffold_489_10
Peptococcaceae bacterium BRH_c4b, Clostridiales, Clostridia, Firmicutes, Bacteria

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9126..10304
DNA (1179bp) protein (393aa)
Predicted two component sensor histidine kinase n=2 Tax=Clostridium RepID=D8GUD2_CLOLD rbh
Histidine kinase {ECO:0000313|EMBL:KJS16184.1}; TaxID=1629717 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c4b.;"
two component sensor histidine kinase rbh
Displaying 10 items

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