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NECEvent2014_3_4_scaffold_414_8

Organism: NECEvent2014_3_4_Clostridium_ultunense-rel_31_20

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 MC: 4 ASCG 14 / 38 MC: 5
Location: 4034..7783

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 76.8
  • Coverage: 999.99
  • Bit_score: 1949
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 76.8
  • Coverage: 999.99
  • Bit_score: 1949
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B189_CLOA9 similarity UNIREF
DB: UNIREF100
  • Identity: 76.8
  • Coverage: 999.99
  • Bit_score: 1949
  • Evalue 0.0
  • rbh

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Taxonomy

Gottschalkia acidurici → Gottschalkia → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3750
ATGGTACATCCTGTAACCTACGGAAAGCGTGTTAGGATGAGTTATTCACGCATTGATGAAGTACTAGATTTGCCTGACTTAATTGAGGTGCAAAAGTCTTCTTATGAATGGTTTTTGAAGGAGGGTCTTAGAGAGGTTTTTGAAGACATTTCTCCTATCCAAGACTATACTGGTAATCTGATATTAGAATTTGTTGATTACCATATTGGGGAAAACATTAAGTATGGCGAGGATGAAGCAAGAGAAAGAGATGCTAATTATTCTGCACCGTTAAAGGTAAAGGTAAGACTCATTAACAAAGAAACTGGTGAAGTAAAAGAGCAAGAGGTTTTTATGGGTGATTTACCTTTAATGACTGATAAGGGTACATTTATTATTAATGGTGCCGAGAGAGTAGTTGTCAGCCAATTAGTTAGGTCACCAGGTGTTTATTTTGTAGAAGAGATAGATAAAACAGGTAAAAGACTGTATTCTTCTACATTGATCCCAAACAGAGGAGCTTGGCTAGAATACGAATCAGATTCTAATGATATTGTTTATGTTAGAGTAGATAGAACAAGAAAGGTTCCTATTACCACATTGTTGAGAGCTCTAAAGCTTCAAAGTAATTCAGAGATTATAGAAGTACTTGGTGAGACAGAGCAAGTATTAAATACATTGGAAAAGGACAACACTACCAATGAAGAAGAAGCATTAATCGAGATATATAAGAGATTGAGACCTGGAGAACCGCCTACAGTGGATAGTGCTAGATCTCTTATTACTAATTTATTTTTTGACCCTAAGAGATATGATTTAGCTAGAGTAGGCAGATATAAATTTAACAAAAAGTTAGCTCTATATAATAGAGTATATGGAAAAAGAGCTGCTAATGATGTTCACAATCTGGAAACTGGAGAAATATTAGTATCCCAAGGTGAAAAAATAACTAGGGATCAGGCTATAGAAATTGAAAATAGTGGTATAAATATGGTAGATGTATTGTTAGAGGATGGGAGAAAAGTAAGAGTTTTAGGGAACAACTTTGTTGATTCTAAAGTGTTTAATCTACCATTTGCATTAGATGAATTTGGATTAAAGGAAAAAGTATATTATCCTTTGATGAAAGAATTAGTAGATACTTATGATAATCCAGAGGAATTAAAAGAGGCTATAGGTGAGAGGCTAAAAGAATTATCGCCAAAGAATATTACTATAGATGATATCGTTGCATCTGTAAACTATGAGTTAAACTTATTTGATGGAATTGGAAATACTGATGATATTGACCATTTAGGAAATAGAAGACTTAGATCTGTCGGAGAGCTACTACAGAACCAATTTAGAATAGGTCTAGCTCGTATGGAAAGAGTAGTTAGAGAAAGAATGACTATTCAAGATATTGATGTTGCTACACCTCAAGATCTAATAAATATAAGACCTGTTGTTGCTTCAATTAAAGAGTTTTTTGGGAGCAGCCAGTTGTCTCAATTCATGGATCAGACAAATCCGTTAGCTGAATTAACACATAAGAGAAGAATGTCTGCATTAGGGCCTGGAGGTCTTAGTCGTGATAGAGCGGGATTTGAGGTAAGAGACGTTCACAATTCCCATTATGGTAGAATGTGTCCTATTGAAACGCCAGAAGGACCTAATATAGGGCTTATAACCTCACTAACTACCTATGCAAGAATCAATGAATATGGTTTTATTGAATCACCATATAGAAAAGTAAAAAAGGGAACTGGTAAAATTACTGGAGAAATTCATTATTTAACTGCTGATGTAGAAGATGAATTTATAATAGCTCAGTCTAATGAGAAACTAAGTCCTGAAGGAGAAATAATAGGTAAAAGGGTTATAGGAAGAGGTAAATCTGGAGTTATAGATATATTCCCGACAGAAGAAGTTGACTATATGGATGTTTCACCTAAGCAACTTGTATCTGTTGGTACGGCTATGATTCCATTCCTAGAAAATGATGATGCTAATAGAGCGCTGATGGGTGCAAACATGCAGAGGCAGGCGGTACCTCTTTTAAAAACAGAATCTCCAATTATTGGAACAGGGATTGAATATAAGGCTGCCAAAGACTCTGGAACTGTAGTTTTATCCAATCATTCTGGAGTTGTAGAAAAGGTTAGTTCAGCAGAAATAGTCATAAGAAAAGATGAAGACAATAAATTAGAAAGATATAAATTGTTGAAGTTTAAACGTTCTAATCAAGGAACTACTATAAATCAAAGACCTATCGTATCGAAAGGTGAAAGAATCGAAAAAGGTCAAGTAATAGCAGACGGCCCAAGTACAAATCTAGGAGAGATTGCATTAGGTAAAAATATATTAATAGCTTTCATGACATGGGAAGGCTATAACTATGAGGATGCTATTTTAATTAATGAAAAGTTAGTAATGGAAGATGTTCTGACTTCAGTTCATATAGAAGAATATGAATCAGAAGCAAGAGATACTAAATTAGGCCCCGAAGAAATAACTAGAGACATTCCAAACGTTGGGGATGATATGTTAAAAGACCTAGATGAAAGAGGAATTATTAGAATAGGTGCAGAAGTAAAATCAGGGGATATATTAGTTGGAAAGGTGACACCTAAGGGAGAAACTGAGCTAACTGCTGAGGAAAGATTGCTTCGAGCTATATTTGGTGAAAAAGCTAGAGAGGTTAGAGACACATCTCTTAGAGTTCCTCATGGTGAAGCGGGTATTATAGTGGATGTTAAAATTTTCTCTAGAGAAAATGGAGACGAATTACCACCAGGCGTTAACCAGATGATAAGAGTGTATATAGCTACTAAGAGGAAGATAAATGTTGGAGATAAAATGTGTGGACGCCATGGAAATAAAGGTGTAGTTTCTAGGATAATGCCTGAGGAAGATATGCCTTATTTACCAGATGGTACGCCTGTACAAATTGTTTTAAATCCTCTTGGAGTACCTTCTCGTATGAACTTGGGGCAGGTGTTAGAGGTTCATCTAGGACTTGCTGCTAAAAAATTGGGATGGCATGTTGCCACACCAGTATTTGATGGTGCTAACGAGGAAGATATTATTCAAGCATTGAAAGATGCTGGGTATCCAGAGAATGGTAAGATCTACCTTAGAGATGGAAGAACTGGAGAAGAATTTAATAATCCAGTAACTGTAGGTTATATGTATATGCTGAAATTACACCATCTTGTTGATGATAAAATCCATGCTAGATCAACTGGACCATACTCTTTGGTTACTCAACAGCCATTAGGGGGTAAAGCTCAGTTTGGTGGACAAAGATTTGGAGAGATGGAGGTTTGGGCACTTGAAGCATATGGAGCAGCCCATACACTACAGGAAATACTAACAGTTAAATCTGATGATATTGTAGGTAGAGTTAAAACTTACGAGGCAGTAGTAAAGGGGGAAAATATACCTGAACCTGGTATTCCAGAATCCTTTAAAGTATTAATAAAAGAACTTCAAAGTTTATCATTAGATATAAAAATTATATCAGAAGATAAAACTGAAATAGAACTTCAAGAATCAGTTGATGATGAATTGTCAGATTTAGAAGTTATGGGTGAAGAATTGACAGGAGAAAAAGTATTTTCTGATGATGAAGATGATGAACAAGAAGAAAGTGAAGATATAGATAGAATAAGAGAAGATGATATACCTACAGGGTTTATTTTAGAAGAAGATACTGATGATATAGATATTAATATTGACTTTGATGAAGATGATTATGAAGAAGAAGAAGAAGATTATGAAGATTTTTAA
PROTEIN sequence
Length: 1250
MVHPVTYGKRVRMSYSRIDEVLDLPDLIEVQKSSYEWFLKEGLREVFEDISPIQDYTGNLILEFVDYHIGENIKYGEDEARERDANYSAPLKVKVRLINKETGEVKEQEVFMGDLPLMTDKGTFIINGAERVVVSQLVRSPGVYFVEEIDKTGKRLYSSTLIPNRGAWLEYESDSNDIVYVRVDRTRKVPITTLLRALKLQSNSEIIEVLGETEQVLNTLEKDNTTNEEEALIEIYKRLRPGEPPTVDSARSLITNLFFDPKRYDLARVGRYKFNKKLALYNRVYGKRAANDVHNLETGEILVSQGEKITRDQAIEIENSGINMVDVLLEDGRKVRVLGNNFVDSKVFNLPFALDEFGLKEKVYYPLMKELVDTYDNPEELKEAIGERLKELSPKNITIDDIVASVNYELNLFDGIGNTDDIDHLGNRRLRSVGELLQNQFRIGLARMERVVRERMTIQDIDVATPQDLINIRPVVASIKEFFGSSQLSQFMDQTNPLAELTHKRRMSALGPGGLSRDRAGFEVRDVHNSHYGRMCPIETPEGPNIGLITSLTTYARINEYGFIESPYRKVKKGTGKITGEIHYLTADVEDEFIIAQSNEKLSPEGEIIGKRVIGRGKSGVIDIFPTEEVDYMDVSPKQLVSVGTAMIPFLENDDANRALMGANMQRQAVPLLKTESPIIGTGIEYKAAKDSGTVVLSNHSGVVEKVSSAEIVIRKDEDNKLERYKLLKFKRSNQGTTINQRPIVSKGERIEKGQVIADGPSTNLGEIALGKNILIAFMTWEGYNYEDAILINEKLVMEDVLTSVHIEEYESEARDTKLGPEEITRDIPNVGDDMLKDLDERGIIRIGAEVKSGDILVGKVTPKGETELTAEERLLRAIFGEKAREVRDTSLRVPHGEAGIIVDVKIFSRENGDELPPGVNQMIRVYIATKRKINVGDKMCGRHGNKGVVSRIMPEEDMPYLPDGTPVQIVLNPLGVPSRMNLGQVLEVHLGLAAKKLGWHVATPVFDGANEEDIIQALKDAGYPENGKIYLRDGRTGEEFNNPVTVGYMYMLKLHHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAHTLQEILTVKSDDIVGRVKTYEAVVKGENIPEPGIPESFKVLIKELQSLSLDIKIISEDKTEIELQESVDDELSDLEVMGEELTGEKVFSDDEDDEQEESEDIDRIREDDIPTGFILEEDTDDIDINIDFDEDDYEEEEEDYEDF*