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NECEvent2014_3_4_scaffold_414

Alias: 173_002_scaffold_414

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_4_scaffold_414_1
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..100
DNA (99bp) protein (33aa)
Elongation factor Tu n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QDQ1_9FIRM
translation elongation factor 1A (EF-1A/EF-Tu)
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridi
NECEvent2014_3_4_scaffold_414_2
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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516..719
DNA (204bp) protein (68aa)
Protein translocase subunit SecE n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AWG5_9CLOT
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobact
preprotein translocase, SecE subunit
NECEvent2014_3_4_scaffold_414_3
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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757..1302
DNA (546bp) protein (182aa)
Transcription termination/antitermination protein NusG n=1 Tax=Clostridium ultunense Esp RepID=M1YSC9_9CLOT rbh
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostri
nusG; transcription antitermination protein NusG
NECEvent2014_3_4_scaffold_414_4
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1395..1820
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AZQ3_CLOA9
rplK; 50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / D
NECEvent2014_3_4_scaffold_414_5
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1877..2575
DNA (699bp) protein (233aa)
50S ribosomal protein L1 n=1 Tax=Clostridium ultunense Esp RepID=M1ZHV1_9CLOT rbh
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
rplA; 50S ribosomal protein L1 rbh
NECEvent2014_3_4_scaffold_414_6
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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2766..3293
DNA (528bp) protein (176aa)
50S ribosomal protein L10 n=1 Tax=Clostridium ultunense Esp RepID=M1Z7B1_9CLOT
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;"
ribosomal protein L10
NECEvent2014_3_4_scaffold_414_7
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3324..3707
DNA (384bp) protein (128aa)
50S ribosomal protein L7/L12 n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GPM5_EUBLK
hypothetical protein
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strai
NECEvent2014_3_4_scaffold_414_8
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4034..7783
DNA (3750bp) protein (1250aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su
DNA-directed RNA polymerase subunit beta n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B189_CLOA9 rbh
NECEvent2014_3_4_scaffold_414_9
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7858..11385
DNA (3528bp) protein (1176aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=1 Tax=Clostridium ultunense Esp RepID=M1ZHV7_9CLOT rbh
NECEvent2014_3_4_scaffold_414_10
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11496..11738
DNA (243bp) protein (81aa)
Firmicutes ribosomal L7Ae family protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CGS5_9CLOT
Firmicutes ribosomal L7Ae family protein {ECO:0000313|EMBL:EOD01480.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalini
ribosomal protein, L7Ae family
NECEvent2014_3_4_scaffold_414_11
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


11767..12186
DNA (420bp) protein (140aa)
30S ribosomal protein S12 n=1 Tax=Clostridium ultunense Esp RepID=M1Z6U8_9CLOT
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
rpsL; 30S ribosomal protein S12
NECEvent2014_3_4_scaffold_414_12
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


12226..12774
DNA (549bp) protein (183aa)
30S ribosomal protein S7 n=1 Tax=Clostridium ultunense Esp RepID=M1YSD5_9CLOT
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
rpsG; 30S ribosomal protein S7
NECEvent2014_3_4_scaffold_414_13
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12832..14901
DNA (2070bp) protein (690aa)
Elongation factor G n=1 Tax=Clostridium ultunense Esp RepID=M1ZAW2_9CLOT rbh
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu
fusA; elongation factor G
NECEvent2014_3_4_scaffold_414_14
Peptoniphilus sp. oral taxon 375, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15025..16116
DNA (1092bp) protein (364aa)
Elongation factor Tu n=1 Tax=Peptoniphilus sp. oral taxon 375 str. F0436 RepID=F9MTW7_9FIRM
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=879308 species="Bacteria; Firmicutes; Clostridia; Clostridi
tuf1-2; Elongation factor Tu
Displaying 14 items

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