ggKbase home page

NECEvent2014_3_4_scaffold_146

Alias: 173_002_scaffold_146

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_4_scaffold_146_1
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..101
DNA (99bp) protein (33aa)
ABC transporter ATP-binding protein (EC:3.6.3.31)
ABC transporter n=2 Tax=Bifidobacterium dentium RepID=D2QAA2_BIFDB
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ETO95602.1}; Flags: Fragment;; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source=
NECEvent2014_3_4_scaffold_146_trna_8
unknown

Not on your lists

comp(271..343)
DNA (73bp)
transferRNA
NECEvent2014_3_4_scaffold_146_trna_7
unknown

Not on your lists

comp(378..450)
DNA (73bp)
transferRNA
NECEvent2014_3_4_scaffold_146_2
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

715..1665
DNA (951bp) protein (317aa)
cbh; conjugated bile salt hydrolase (EC:3.5.1.24)
Conjugated bile salt hydrolase n=2 Tax=Bifidobacterium dentium RepID=D2QAA6_BIFDB rbh
Putative choloylglycine hydrolase {ECO:0000313|EMBL:ETO95182.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp.
NECEvent2014_3_4_scaffold_146_3
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1950..2375
DNA (426bp) protein (142aa)
Transcriptional regulator, MerR family n=4 Tax=Bifidobacterium dentium RepID=D2QAA7_BIFDB
MerR family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EFM42242.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27
NECEvent2014_3_4_scaffold_146_4
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2421..3467
DNA (1047bp) protein (349aa)
adh; alcohol dehydrogenase (EC:1.1.1.73)
Alcohol dehydrogenase {ECO:0000313|EMBL:ADB09744.1}; EC=1.1.1.73 {ECO:0000313|EMBL:ADB09744.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
Alcohol dehydrogenase n=4 Tax=Bifidobacterium dentium RepID=D2QAA8_BIFDB rbh
NECEvent2014_3_4_scaffold_146_5
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3537..4295
DNA (759bp) protein (253aa)
4-carboxymuconolactone decarboxylase n=2 Tax=Bifidobacterium dentium RepID=D2QAA9_BIFDB rbh
Carboxymuconolactone decarboxylase family protein {ECO:0000313|EMBL:ETO95184.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifi
4-carboxymuconolactone decarboxylase
NECEvent2014_3_4_scaffold_146_6
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4370..5491)
DNA (1122bp) protein (374aa)
Methionine synthase, vitamin-B12 independent {ECO:0000313|EMBL:ETO95179.1}; EC=2.1.1.14 {ECO:0000313|EMBL:ETO95179.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacter
methionine synthase vitamin-B12 independent protein (EC:2.1.1.14)
Methionine synthase vitamin-B12 independent protein n=1 Tax=Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1) RepID=D2QAB0_BIFDB rbh
NECEvent2014_3_4_scaffold_146_7
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5708..6421
DNA (714bp) protein (238aa)
GDSL-like lipase/acylhydrolase n=4 Tax=Bifidobacterium dentium RepID=D2QAB1_BIFDB rbh
GDSL-like lipase/acylhydrolase rbh
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27059.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium
NECEvent2014_3_4_scaffold_146_8
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6507..7532
DNA (1026bp) protein (342aa)
Cation diffusion facilitator family transporter n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q6G2_9BIFI rbh
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:ETO95186.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifido
cation transporter
NECEvent2014_3_4_scaffold_146_9
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7564..9165)
DNA (1602bp) protein (534aa)
ABC transporter ATP-binding protein (EC:3.6.3.41)
ATP binding protein of ABC transporter n=4 Tax=Bifidobacterium dentium RepID=D2QAB3_BIFDB rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ETO95170.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium s
NECEvent2014_3_4_scaffold_146_10
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9248..9964)
DNA (717bp) protein (239aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q6G0_9BIFI rbh
AAA domain protein {ECO:0000313|EMBL:ETO95174.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
ABC transporter2C ATP-binding protein
NECEvent2014_3_4_scaffold_146_11
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10220..10825
DNA (606bp) protein (202aa)
Isochorismatase family protein {ECO:0000313|EMBL:ETO95187.1}; EC=3.-.-.- {ECO:0000313|EMBL:ETO95187.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidob
pncA; Pyrazinamidase/Nicotinamidase (EC:3.5.1.19)
Isochorismatase family protein n=2 Tax=Bifidobacterium dentium RepID=E0Q6F9_9BIFI rbh
NECEvent2014_3_4_scaffold_146_12
unknown

Not on your lists

10881..10982
DNA (102bp) protein (34aa)

This feature has no annotations

NECEvent2014_3_4_scaffold_146_13
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11464..12957
DNA (1494bp) protein (498aa)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XTU3_9BIFI rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ETO95164.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium s
ABC transporter, ATP-binding protein
NECEvent2014_3_4_scaffold_146_14
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13062..14687)
DNA (1626bp) protein (542aa)
malate dehydrogenase (EC:1.1.1.38)
Malic enzyme, NAD binding domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q6F5_9BIFI rbh
Malic enzyme, NAD-binding domain protein {ECO:0000313|EMBL:ETO95189.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacteri
NECEvent2014_3_4_scaffold_146_15
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14894..15640)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Bifidobacterium dentium JCVIHMP022 RepID=E1N7U2_9BIFI rbh
DNA alkylation repair enzyme {ECO:0000313|EMBL:ETO95183.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE1
hypothetical protein
NECEvent2014_3_4_scaffold_146_16
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15749..16411)
DNA (663bp) protein (221aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q6F3_9BIFI rbh
Membrane protein, PF02588 family {ECO:0000313|EMBL:ETO95178.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. M
hypothetical protein
NECEvent2014_3_4_scaffold_146_17
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16600..16926
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1SAI5_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM42226.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27
NECEvent2014_3_4_scaffold_146_18
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17107..18114
DNA (1008bp) protein (336aa)
VanZ-like protein n=2 Tax=Bifidobacterium dentium RepID=E0Q6F1_9BIFI rbh
VanZ-like protein {ECO:0000313|EMBL:ETO95176.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
membrane protein
NECEvent2014_3_4_scaffold_146_trna_1
unknown

Not on your lists

18241..18313
DNA (73bp)
transferRNA
NECEvent2014_3_4_scaffold_146_19
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18370..18738)
DNA (369bp) protein (123aa)
Cupin 2 domain-containing protein n=2 Tax=Bifidobacterium dentium RepID=D2QAC1_BIFDB
cupin
Cupin 2 domain-containing protein {ECO:0000313|EMBL:ADB09757.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium denti
NECEvent2014_3_4_scaffold_146_20
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18830..19060
DNA (231bp) protein (77aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1SAI2_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:ETO95190.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
NECEvent2014_3_4_scaffold_146_21
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19356..20831
DNA (1476bp) protein (492aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1SAI1_9BIFI rbh
PF11855 family protein {ECO:0000313|EMBL:ETO95168.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
NECEvent2014_3_4_scaffold_146_22
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20837..21544
DNA (708bp) protein (236aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1SAI0_9BIFI rbh
PF13835 domain protein {ECO:0000313|EMBL:ETO95177.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
NECEvent2014_3_4_scaffold_146_23
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21544..25050
DNA (3507bp) protein (1169aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1SAH9_9BIFI rbh
Uncharacterized protein {ECO:0000313|EMBL:ETO95167.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
NECEvent2014_3_4_scaffold_146_24
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25116..28109
DNA (2994bp) protein (998aa)
uvrA; excinuclease ABC subunit A (EC:3.6.3.28) rbh
UvrABC system protein A n=2 Tax=Bifidobacterium dentium RepID=E0Q6E5_9BIFI rbh
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_0
NECEvent2014_3_4_scaffold_146_25
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28106..30424
DNA (2319bp) protein (773aa)
UvrABC system protein C n=2 Tax=Bifidobacterium dentium RepID=D2QAC7_BIFDB rbh
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_0
uvrC; excinuclease ABC subunit C
NECEvent2014_3_4_scaffold_146_26
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30461..31435
DNA (975bp) protein (325aa)
Shikimate 5-dehydrogenase (EC:2.7.1.71)
Shikimate dehydrogenase substrate binding domain protein n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1SAH6_9BIFI rbh
Shikimate dehydrogenase substrate binding domain protein {ECO:0000313|EMBL:EFM42217.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source
NECEvent2014_3_4_scaffold_146_27
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31435..32373
DNA (939bp) protein (313aa)
UPF0042 nucleotide-binding protein BDP_1134 n=2 Tax=Bifidobacterium dentium RepID=D2QAC9_BIFDB rbh
Nucleotide-binding protein HMPREF1494_0734 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidob
hypothetical protein rbh
Displaying items 1-30 of 62 in total

View Taxonomy