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NECEvent2014_3_4_scaffold_417_12

Organism: NECEvent2014_3_4_Bifidobacterium_MSTE12-rel_58_13

near complete RP 51 / 55 MC: 4 BSCG 49 / 51 ASCG 13 / 38
Location: 10019..10402

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 n=4 Tax=Bifidobacterium dentium RepID=D2Q592_BIFDB similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 127.0
  • Bit_score: 250
  • Evalue 1.20e-63
rplT; 50S ribosomal protein L20P similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 127.0
  • Bit_score: 250
  • Evalue 3.30e-64
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 127.0
  • Bit_score: 250
  • Evalue 1.60e-63

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Taxonomy

Bifidobacterium sp. MSTE12 → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 384
ATGGCACGTGTCAAGCGCGCAGTGAACGCCCACAAGAAGCGTCGCGTCGTTCTCGAGAGGGCTTCCGGTTACCGCGGACAGCGCTCCCGCCTGTATCGCAAGGCCAAGGAGCAGCTGCTTCACTCCTTTACCTACAACTTCCGCGACCGCAAGGCTCGCAAGGGCGACTTCCGCAAGCTGTGGATCCAGCGTATCAACGCCGCCGTCCGCGCTGAAGGCATCACCTACAACCGCTTCATCCAGGGCCTGCACCTCGCCGGCATTGAGCTTGATCGTCGCGCTCTGGCCGAACTGGCCGTCTCCGATCCGGAGACCTTCAAGGCCATCGTCGAGCAGGCCAAGGCCGCTCTTCCGGCTGATGTGAACGCTCCGAAGGAAGCCTGA
PROTEIN sequence
Length: 128
MARVKRAVNAHKKRRVVLERASGYRGQRSRLYRKAKEQLLHSFTYNFRDRKARKGDFRKLWIQRINAAVRAEGITYNRFIQGLHLAGIELDRRALAELAVSDPETFKAIVEQAKAALPADVNAPKEA*