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NECEvent2014_3_4_scaffold_2856_1

Organism: NECEvent2014_3_4_Clostridium_sporogenes-rel_29_5

near complete RP 44 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 16 / 38 MC: 1
Location: 2..283

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=11 Tax=Clostridium RepID=A5I4W4_CLOBH similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 93.0
  • Bit_score: 180
  • Evalue 1.10e-42
sigE; sporulation sigma factor SigE similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 93.0
  • Bit_score: 180
  • Evalue 3.10e-43
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes ATCC 1 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 93.0
  • Bit_score: 180
  • Evalue 1.50e-42

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Taxonomy

Clostridium sporogenes → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 282
GATGGAAATGAGCTGTTACTTTCAGATATATTAGGTACAGATAATGATGAGGTTTATAATTTAATAGAAGATGAAGTAGACAAACAATTATTGCTATTAGCTATGAAAAAATTAAACGAAAGAGAAAAGGAAATAGTAAGATTAAGATTTGGTCTTAATGGGAAAAGAGAAAAAACTCAAAAGGAAGTAGCAGATATGCTGGGTATATCTCAATCCTACATATCAAGGTTAGAAAAAAGAATAATTAAGACTTTAAAAAAAGAAATAAATAAAATGGTTTAG
PROTEIN sequence
Length: 94
DGNELLLSDILGTDNDEVYNLIEDEVDKQLLLLAMKKLNEREKEIVRLRFGLNGKREKTQKEVADMLGISQSYISRLEKRIIKTLKKEINKMV*