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NECEvent2014_3_4_scaffold_2856_2

Organism: NECEvent2014_3_4_Clostridium_sporogenes-rel_29_5

near complete RP 44 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 16 / 38 MC: 1
Location: 358..1029

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Clostridium botulinum A1 str. CFSAN002368 RepID=S8CNB1_CLOBO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 224.0
  • Bit_score: 441
  • Evalue 6.30e-121
sigG; sporulation sigma factor SigG similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 224.0
  • Bit_score: 441
  • Evalue 1.80e-121
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1408283 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum CDC_14 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 224.0
  • Bit_score: 441
  • Evalue 8.90e-121

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Taxonomy

Clostridium botulinum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 672
ATGGTTATTAATAAAGTTGAAATTTGTGGAGTAAATACATCAAAATTGCCAGTATTAAAAGATAAAGAGATGAAAAAATTACTGGTAAGGATTAGGAACGGTGAAACAGAATGTAGAGAAGAATTTATACAAGGGAATTTAAGGTTAGTACTAAGTGTAATAAAAAGATTTAACAATCGAGGGGAAAATGTGGATGATCTTTTTCAAGTTGGATGTATAGGCCTTATAAAAGCTATAGATAATTTTGATTTAAGTCAAAATGTAAAATTCTCTACTTATGCTGTTCCTATGATAATAGGAGAAATAAGAAGATACCTAAGAGATAATAATTCCATAAGAGTTAGTAGATCTTTAAGAGATATAGCCTATAAAGCTCTACAGGCTAGAGACAAATTAATAAAAAATAATAATAAAGAACCAACAGTGTCTCAAATAGCTAAAGAATTAGAATTACCAAGAGAAGAGGTAGTGTTTGCTTTAGATGCTATACAGGATCCAGTATCTTTATTTGAACCTATATATCATGATGGCGGTGATGCCATATTTGTTATGGATCAAATAAGTGACACTAAAAATGTAGATGAGAACTGGATAGAAAACATATCTATAAAAGAAGCTATGAAAAAATTAAATGACAGAGAAAAGCTAATACTTAATTTAAGGTTTTTTGAT
PROTEIN sequence
Length: 224
MVINKVEICGVNTSKLPVLKDKEMKKLLVRIRNGETECREEFIQGNLRLVLSVIKRFNNRGENVDDLFQVGCIGLIKAIDNFDLSQNVKFSTYAVPMIIGEIRRYLRDNNSIRVSRSLRDIAYKALQARDKLIKNNNKEPTVSQIAKELELPREEVVFALDAIQDPVSLFEPIYHDGGDAIFVMDQISDTKNVDENWIENISIKEAMKKLNDREKLILNLRFFD